Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00443 ATGGAGTCTATTGCCTCCAATTCTaattcaacatcatcaaataaCACTAACAATAATAACCGTCGCCGTCATTCTCGTTTCAAACTTAGCCAACCAATTTCAGACAGAATAGTTAGAGCTCTCAAACATCGTCTCCGTCTCCTCCACCGTTCGGGCTCAACCTTCTTCATATTCGGCGCAACAGGTAATGTCTACACGGTAACCATATCGTCAACTCCCTCATGCACGTGCCCTGACCGGACAACACCGTGCAAACACATCCTCTTTGTTATGATTCGAGTATTGGGCGTTTCACAGAATGATGCATGTGTTCGTAGAAGAAACCTTCGACCGTGTCAACTTCAACGACTTCTTAGCTTGCCAACATTGTCCGAAGCGGTTGCAGGGTTTAAACTTCGACAAAGGTTTCATCAGTTGTTTTCCGAAGGAGGGACGTCGAAGAAGGAGAGTGATGTAGAGATGGAGGAAGGTTCTGCTTGTCCTGTTTGTCTTGAAGAAATGGAAAAGGAAGAGAGATTGGTGGCTTGTGGAACATGTAGGAATGTTATTCATGAAGAATGTTTGGTTAGGTGGAAGAGAAGTAGAGGAAGAAGATCAGCTAGTTGTGTGATTTGTAGGGCAAGGTGGAGGGATAGAACAGAACAGGATAAGTATGTTAATTTATCTGCTTATGTTAGTGAAGATGATTTGATGGCACAATCATCTGGGGGTATTTGCACTGGCTAG 726 0.4311 MESIASNSNSTSSNNTNNNNRRRHSRFKLSQPISDRIVRALKHRLRLLHRSGSTFFIFGATGNVYTVTISSTPSCTCPDRTTPCKHILFVMIRVLGVSQNDACVRRRNLRPCQLQRLLSLPTLSEAVAGFKLRQRFHQLFSEGGTSKKESDVEMEEGSACPVCLEEMEKEERLVACGTCRNVIHEECLVRWKRSRGRRSASCVICRARWRDRTEQDKYVNLSAYVSEDDLMAQSSGGICTG 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00443 241 Pfam Ring finger domain 159 206 IPR001841 -
Tsu07g00443 241 PANTHER - 1 231 - -
Tsu07g00443 241 MobiDBLite consensus disorder prediction 1 20 - -
Tsu07g00443 241 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 144 224 IPR013083 -
Tsu07g00443 241 ProSiteProfiles Zinc finger RING-CH-type profile. 152 212 IPR011016 GO:0008270
Tsu07g00443 241 Pfam SWIM zinc finger 65 93 IPR007527 GO:0008270
Tsu07g00443 241 ProSiteProfiles Zinc finger RING-type profile. 160 206 IPR001841 -
Tsu07g00443 241 PANTHER RING FINGER AND SWIM DOMAIN-CONTAINING PROTEIN 2 1 231 IPR039903 GO:0061630
Tsu07g00443 241 MobiDBLite consensus disorder prediction 1 28 - -
Tsu07g00443 241 ProSiteProfiles Zinc finger SWIM-type profile. 65 95 IPR007527 GO:0008270
Tsu07g00443 241 SUPERFAMILY RING/U-box 150 214 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00443 155 232 C3H Transcription Factor Family AT3G58720 32.530 1.28e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00443 - - var:108321788 349.747
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00443 07 3401872 3402624 Tsu07g00443 07 3401872 3402624 ECH