Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00436 ATGGCCAAAGAAACTTCAAAATCCCTCACGTTTATGTGCTTTTTCATGTTCATGTTCATGCTCAACTTCTACTCATCCCATGGAGAACAAGAGTTTGAGCTTCTCTTATCCTTCAAAGCATCCATCAAAACTGATCCTTTAAACTTTCTTTCCAACTGGGTCAACACTTCCTCTATTACTATCTGCAAGTGGCGTGGCATAACCTGCGACAACTGGTCGCATGTTAGCGCCGTGTCACTCTCAGGAAAAAACCTCTCTGGCGAGGTTTCCTCGTCTATGTTCCAACTTCCACATGTTACAAACCTCGACCTCTCCAACAATCAACTTGTTGGAGAAGTCGTCTTCAACTCTCCCTTCCTGTCTTCACTTCTTTACCTCAATctcagcaacaacaacctcacCGGTTCTTTACCACAATCCTTATTTTCATCATCGTTTATCAACCTTGAAACTCTTGATCTCTCAAACAACATGTTTTCAGGCAAAATACCAGACCAAATTGGATTCCTTTCAAGCTTAACATATATTGATCTAGGTGGTAATGTTTTAGTAGGAAAAATTCCAAATTCCATCACCAACATGACAAGTTTAGAGTACTTAACTTTGGCTTCAAACCAATTAGTGGGTGAGATTCCAACAGAGATAAGCCTAATGAAGAGGTTGAAATGGATCTACCTAGGATACAACAATCTTTCAGGTGAGATTCCAAAGAGCATTGGAAACTTACTTTCATTGAAGCACCTTAATCTTGTTTACAACAATCTCACAGGACAAATTCCTGAATCACTTGGAAACCTCACAAATCTTCAATATCTCTTTCTCTACCTAAACAAACTCACTGGTCCAATTCCCAAATCCATATTCCAATTGAAGAATCTTATTTCACTTGATCTCAGTGATAATTCTCTCTCAGGAGAAATTTCAAACCTTGTTATTAACCTTCAAAAACTAGAGATTCTTCATCTTTTCTCAAACAACTTCACAGGTAAAATTCCAAACACTATAACATCTTTACCTCACCTTCAAGTTCTTCAACTCTGGTCAAACAAATTAACAGGTGAAATTCCACAAACACTTGGTATGCATAACAACCTCACAATTCTTGACCTCTCTTCAAACAACCTCACAGGCAAAATACCAAACAGCTTGTGTGCATccaaaaatcttcaaaaacttATCCTCTTTTCAAACTCTTTCAAAGGTGAAATCCCAAAAGGATTAACCTCTTGTAAAACCTTACAAAGAGTGAGACtccaaaacaacaaattatCTGGAAAATTACCATTGGAAATCACCCAATTGCACCAGATATACTTGTTGGATATCTCTGGAAACAATCTCTCTGGAAGAATCAATGATAGAAAATGGAACATGCCATCACTTCAAATGCTTAATTTAGCTAACAACAATTTCTATGGAGAATTACCAAACTCTTTTGGTAGTAACAAACTTGAAGGATTGGACTTATCACAGAATCAGTTTTCTGGTTACATTCAAATTGGTTTCAAAAATTTACCAGAGCTTGTTCAATTGAAACTCAACAATAACAAACTCTTTGGAAAATTTCCAGAAGAACTTTTAAAATGCAGCAAACTTGTTTCTTTAGAATTAAGTCATAATCAGTTAATCGGCGAGATTCCAATGAAACTCGCCGATATGCCAGTTCTCGGTTTACTTGACTTATCGGAAAATCAATTTTCCGGTGAAATTCCAAAGAATTTAGGAAATGTTGAATCGCTTGTTGAAGTTAACATATCGTATAATCATTTCCATGGAAGATTACCTTCCACCGAAGCTTTCTTTGCCATCAATGCAAGTTCAGTCGCCGGAAATAATCTCTGTGACGGTGGCGGCGATGGTTCTAACGGTTTGCCACTGTGCAAAAGAAATAATCAGATGAATTCAACTACTTTGTTTTTTTCAGTTTGTGTTGTGTTAATGGGTTTGGCTATTTTCGTTGGTGCTGGTTTTCTCGTTGTTTTCGTgcaaagaaggaagaagaattTTGAGGTACGAAGAGTGGTTGAAAATGAAGATGGTTCTTGGGAAGTGATTTTCTTCGATTCTACAGCGTCGAAATTTGTTACCGTTGAGGATGTTTTATCATCGGTTAAAGAAGGAAAAGCGATTTCAAAAGGAAGAAACTGGGTTTCGTACGAAGGAAAGTGTGTGACCAATGAAATGCGATTCGTGGTGAAAGAAATAATCGACACGAATTCTGTTTCGGTTAGTTTTTGGGATGATACGGTGACGTTTGGTAAAAAAGTGAGACATGAGAATATTGTTAAGCTTATTGGAATGTTTAGGTGTGGTAAAAGAGGGTATTTGGTTTATGAATTTGAAGAGGGAAAAAATTTGAGGGAAATTTTGCATAATTTGAGTTGGCAAAAGAGGTGGAAAATTGCTGTGGGGGTTGCAAAAGCAATTAAGTTCTTGCATTGTGAATGTTTGTGGATTGGTTTGGTTGGTGAGGCGTCACCGGAGATGGTTTTGGTGGACGGAAAAGGTGTTCCTCGCCTCGAACTCAACCCTCCCGGAATAGGAACACCGATTATGGATATGAAATGTTTTGTTTCTTCCTCATACATAGCTCCAGAGAAAAGAAATGGGAAAGATGTGACAGAGAAGAGTGAGATATATGGCTTTGGAGTTATGCTGATTGAGTTATTAACAGGAAGAAGCACCATAGACATAGAAGCAGGAAATGGTATTCATCACAAGAATAATATTGTTGAATGGGCCCGTTATTGTTACACTGATTGTCATCTTGACACGTGGATAGATCCTGTTATGATCAAGGGTGGAGATGTATCATCTTATCAAAACGATATTGTTGAGACCATGAATCTTGCATTGCACTGTACCGCAGCTGATCCCACCACTAGGCCATGCGCAAGAGATGTACTCAAAGCCCTAGCCACTGTTCATTGCAGCACAAACACTTTTTGCTGA 2952 0.3726 MAKETSKSLTFMCFFMFMFMLNFYSSHGEQEFELLLSFKASIKTDPLNFLSNWVNTSSITICKWRGITCDNWSHVSAVSLSGKNLSGEVSSSMFQLPHVTNLDLSNNQLVGEVVFNSPFLSSLLYLNLSNNNLTGSLPQSLFSSSFINLETLDLSNNMFSGKIPDQIGFLSSLTYIDLGGNVLVGKIPNSITNMTSLEYLTLASNQLVGEIPTEISLMKRLKWIYLGYNNLSGEIPKSIGNLLSLKHLNLVYNNLTGQIPESLGNLTNLQYLFLYLNKLTGPIPKSIFQLKNLISLDLSDNSLSGEISNLVINLQKLEILHLFSNNFTGKIPNTITSLPHLQVLQLWSNKLTGEIPQTLGMHNNLTILDLSSNNLTGKIPNSLCASKNLQKLILFSNSFKGEIPKGLTSCKTLQRVRLQNNKLSGKLPLEITQLHQIYLLDISGNNLSGRINDRKWNMPSLQMLNLANNNFYGELPNSFGSNKLEGLDLSQNQFSGYIQIGFKNLPELVQLKLNNNKLFGKFPEELLKCSKLVSLELSHNQLIGEIPMKLADMPVLGLLDLSENQFSGEIPKNLGNVESLVEVNISYNHFHGRLPSTEAFFAINASSVAGNNLCDGGGDGSNGLPLCKRNNQMNSTTLFFSVCVVLMGLAIFVGAGFLVVFVQRRKKNFEVRRVVENEDGSWEVIFFDSTASKFVTVEDVLSSVKEGKAISKGRNWVSYEGKCVTNEMRFVVKEIIDTNSVSVSFWDDTVTFGKKVRHENIVKLIGMFRCGKRGYLVYEFEEGKNLREILHNLSWQKRWKIAVGVAKAIKFLHCECLWIGLVGEASPEMVLVDGKGVPRLELNPPGIGTPIMDMKCFVSSSYIAPEKRNGKDVTEKSEIYGFGVMLIELLTGRSTIDIEAGNGIHHKNNIVEWARYCYTDCHLDTWIDPVMIKGGDVSSYQNDIVETMNLALHCTAADPTTRPCARDVLKALATVHCSTNTFC 983
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00436 983 ProSiteProfiles Leucine-rich repeat profile. 122 144 IPR001611 GO:0005515
Tsu07g00436 983 Pfam Leucine rich repeat 148 207 IPR001611 GO:0005515
Tsu07g00436 983 Pfam Leucine rich repeat 339 398 IPR001611 GO:0005515
Tsu07g00436 983 Pfam Leucine rich repeat 220 279 IPR001611 GO:0005515
Tsu07g00436 983 Pfam Leucine rich repeat 483 542 IPR001611 GO:0005515
Tsu07g00436 983 SMART LRR_typ_2 458 482 IPR003591 -
Tsu07g00436 983 SMART LRR_typ_2 146 170 IPR003591 -
Tsu07g00436 983 SMART LRR_typ_2 505 529 IPR003591 -
Tsu07g00436 983 SMART LRR_typ_2 242 265 IPR003591 -
Tsu07g00436 983 SMART LRR_typ_2 96 117 IPR003591 -
Tsu07g00436 983 SMART LRR_typ_2 338 362 IPR003591 -
Tsu07g00436 983 SMART LRR_typ_2 553 577 IPR003591 -
Tsu07g00436 983 SMART LRR_typ_2 194 218 IPR003591 -
Tsu07g00436 983 SMART LRR_typ_2 364 386 IPR003591 -
Tsu07g00436 983 SMART LRR_typ_2 120 144 IPR003591 -
Tsu07g00436 983 SMART LRR_typ_2 266 290 IPR003591 -
Tsu07g00436 983 Gene3D Transferase(Phosphotransferase) domain 1 782 981 - -
Tsu07g00436 983 ProSiteProfiles Protein kinase domain profile. 704 975 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00436 983 ProSiteProfiles Leucine-rich repeat profile. 364 386 IPR001611 GO:0005515
Tsu07g00436 983 Gene3D Ribonuclease Inhibitor 30 143 IPR032675 -
Tsu07g00436 983 Gene3D Ribonuclease Inhibitor 144 216 IPR032675 -
Tsu07g00436 983 Gene3D Phosphorylase Kinase; domain 1 689 780 - -
Tsu07g00436 983 SUPERFAMILY L domain-like 49 377 - -
Tsu07g00436 983 PANTHER - 7 976 - -
Tsu07g00436 983 SMART serkin_6 704 974 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00436 983 Gene3D Ribonuclease Inhibitor 313 619 IPR032675 -
Tsu07g00436 983 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Tsu07g00436 983 SUPERFAMILY RNI-like 283 595 - -
Tsu07g00436 983 Gene3D Ribonuclease Inhibitor 217 312 IPR032675 -
Tsu07g00436 983 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 7 976 - -
Tsu07g00436 983 SUPERFAMILY Protein kinase-like (PK-like) 681 975 IPR011009 -
Tsu07g00436 983 Pfam Protein kinase domain 709 970 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00436 Tsu-Chr7 3344027 3347849 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00436 11 972 Receptor kinase-like Gene Family AT2G25790 49.641 0.0 865
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Singleton Tsu07g00436 Pkinase 4.4e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00436 - - gmx:100777118 1347.03
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00436 07 3344027 3347849 Tsu07g00436 07 3344027 3347849 ECH