Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00428 ATGGATGAGTATGATAGTGGTGGACGCAGTGCTGATAAAGGTCCGGGAGCCGATGATGAAGGGAGCACACCTCCACTTCCTGAGAAGGTTCAAGTCGGTGGTTCTCCGACTTACAGACTCGCTAGAAAACTTGGGAAGGGAGGATTTGGACAAGTGTATGTCGGTCGACGCATAGGAGTTGGCTCTGGTGCTGTTGAGGTAGCATTAAAATTTGAGCATAGAAGCAGCAAAGGGTGCAATTATGGACCTCCACACGAGTGGCAGGTTTACAATACATTAGGTGGTAGTCACGGTGTTCCGCGAGTACATTACAAGGGACGACAAGGTGACTACTACATTATGGTCATGGATATGCTTGGCTCTAGTCTATGGGATGTTTGGAACAATAACTCACACACGATGTCTACTGAAATGGTGGCATGTATTGCAATTGAGGCTATCTCCATATTAGAGAAGATGCATTGCAGAGGATATGTGCATGGTGATGTAAAGCCTGAAAACTTTTTGCTTGGACCCTCGGGATCCCCTGAtgagaaaaaattgtttctGGTTGATCTTGGATTAGCAACTAGGTGGCGTGATAGTTCAACTGGCCTTCATGTTGATTATGATCAACGCCCAGATGTATTTAGGGGTACAGTTCGTTATGCCAGTGTGCATGCACATCTTGGTAGAACAGGTAGCAGGAGAGATGACTTAGAATCTCTTGCTTACACACTTGTATTCCTTCTTCGTGGTCGGTTACCTTGGCAAGGATATCAGGGAGAAAATAAAGGATTTCTTGTGTGCAAGAAAAAGATGGCAACTTCTCCCGAAgctttgtgttgtttttgtccTGCCCCTTTCCGGCAGTTTGTTGAATATGTAGTGAATTTGAAGTATGATGAAGAACCAAATTATGCTAAATATATATCCCTTTTTGATGGAATTGTGGGTCCAAATCCTGCCATTAGGCCACTAAATACCGAGGGTGCCCAGAAGCTCATATGTCAGGTTGGGCAAAAGAGAGGACGATTGACCATGGAAGAGGATGACGAAGAACAACCAAAGAAGAAGGTCCGAATGGGACTGCCAGCAACACAGTGGATTAGTGTTTATAATGCTCGTAGACCAATGAAACAAAGGTATCATTACAATGTGGCTGATGAGCGGCTTTCCCAACACATTGTAAAAGGATATGAAGATGGTTTATTTATTAGCAGTGTGGCTTCTTGTGCTAATCTTTGGGCACTCATTATGGATGCTGGCACTGGTTTCATAGCACAAGTTTATGAACTCTCTTCCAGTTTTCTTCACAAGGAATGGATTATGGAACAGTGGGACAAGAATTATTACATCAGTGCCATAGCTGGAGCTAGTAATGGGTCCTCGTTGGTTGTAATGTCAAAAGGGACCCAATACACGCAACAATCCTATAAAGTCAGTGACTCGTTTCCGTTTAAGTGGATCAACAAAAAATGGAGAGAAGGATTTTACGTCACTGCTATGGCCACTGCTGGCACTAGATGGGCAATTGTTATGTCCCGTGGTGCTGGATTTTCAGACCAGGTTGTGGAACTTGATTTCCTGTATCCTAGTGAAGGTATTCATCGAAGGTGGGAAAACAATTACCGCATTACTGCAACTGCCGCGACGCCTGATCAAGCTGCTTTTATTTTAAGTGTCCCAAGAAGAAAACCACCTGATGAAACACAAGAAACGCTCCGCACGTCTGATTTTCCTAGTAGTCATGTTAAGGAAAAATGGGCAAAGAACCTCTATATTGCATCTATTTCTTTTGGGAGAACAGTTTCATAA 1797 0.429 MDEYDSGGRSADKGPGADDEGSTPPLPEKVQVGGSPTYRLARKLGKGGFGQVYVGRRIGVGSGAVEVALKFEHRSSKGCNYGPPHEWQVYNTLGGSHGVPRVHYKGRQGDYYIMVMDMLGSSLWDVWNNNSHTMSTEMVACIAIEAISILEKMHCRGYVHGDVKPENFLLGPSGSPDEKKLFLVDLGLATRWRDSSTGLHVDYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLVFLLRGRLPWQGYQGENKGFLVCKKKMATSPEALCCFCPAPFRQFVEYVVNLKYDEEPNYAKYISLFDGIVGPNPAIRPLNTEGAQKLICQVGQKRGRLTMEEDDEEQPKKKVRMGLPATQWISVYNARRPMKQRYHYNVADERLSQHIVKGYEDGLFISSVASCANLWALIMDAGTGFIAQVYELSSSFLHKEWIMEQWDKNYYISAIAGASNGSSLVVMSKGTQYTQQSYKVSDSFPFKWINKKWREGFYVTAMATAGTRWAIVMSRGAGFSDQVVELDFLYPSEGIHRRWENNYRITATAATPDQAAFILSVPRRKPPDETQETLRTSDFPSSHVKEKWAKNLYIASISFGRTVS 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00428 598 ProSitePatterns Serine/Threonine protein kinases active-site signature. 158 170 IPR008271 GO:0004672|GO:0006468
Tsu07g00428 598 Gene3D Transferase(Phosphotransferase) domain 1 17 355 - -
Tsu07g00428 598 PANTHER CASEIN KINASE-RELATED 15 572 - -
Tsu07g00428 598 MobiDBLite consensus disorder prediction 1 16 - -
Tsu07g00428 598 Pfam Protein kinase domain 38 265 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00428 598 CDD STKc_CK1 38 307 - -
Tsu07g00428 598 ProSiteProfiles Protein kinase domain profile. 38 317 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00428 598 ProSitePatterns Protein kinases ATP-binding region signature. 44 70 IPR017441 GO:0005524
Tsu07g00428 598 SMART serkin_6 38 329 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00428 598 SUPERFAMILY Protein kinase-like (PK-like) 37 312 IPR011009 -
Tsu07g00428 598 MobiDBLite consensus disorder prediction 1 34 - -
Tsu07g00428 598 PANTHER - 15 572 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00428 Tsu-Chr7 3280398 3285488 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00428 38 250 EF-hand Containing Proteins AT4G04720 26.728 7.53e-10 59.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Tsu07g00428 Pkinase 2.5e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00428 - - gmx:100800125 1124.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00428 07 3280398 3285488 Tsu07g00428 07 3280398 3285488 ECH