Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00417 ATGTCCAAACTACCCCTCTTCATTTCAAAATTCTCATTTCTTCTGTTCTTACTAGTAAACTTCATAGTACCCTCTCTGGTAATTTCACAAGCCACAAACACCGAAGTATCAATCCTTCTCAATCTTAAACGTCAACTCGGTGATCCACCGTCGCTCCAATCATGGAAACCGTCGTCGTCTTCACCGTGCAATTGGTCAGAGATCAATTGCACTGGCGGATCAGTGACGGAGCTTCTCCTCCCTACCAAAGACATCACCGCACAGAAACTTCCTTCAACAATTTGTGACCTCAAGAATCTTACTAAGCTTGATCTCTCTAACAACTCCATCGCCGGGGAGTTTCCGACGTGGCTGCAAAACTGCTCCAACCTCCAGTACCTCGATCTCTCCCAGAACTACTTCGCCGGTCAAATCCCCGATGACATCGGCAACATCAAATCACTCACGTACCTCAACCTCGGCGGCAACAGCTTCATCGGCGATGTCCCTGCAGCAATCGGAAAACTCTCAAAGCTTCAAACACTTCACCTCTTTCGAAACAACTTCAACGGTACCTTCCCGAAGGAAATCGGTGACTTAACCAATCTCGAAATTCTAGGTTTAGCTTATAGCTTCAAACTTAAACCCATGGCAATTCCGGTTGAATTCGGAAAATTGAAGAACCTGAAATACATGTGGATATCACAGTGTAACTTGATCGGAAACATTCCAGAAAGCTTCGAGAATCTCACGAATCTTGAACACTTGGATTTATCAACCAACAATTTAACAGGAAACATACCTACAAATTTGTTCTTGCTGAAAAACTTGAATGTTTTGTACCTTTACCTTAATAGGTTAACCGGTGAGATACCTAATTCTGTTCAGGCCTTGAATTTGACAAACATTGATTTATCAATGAACAATTTAACTGGTTCAATACCCGAAGAATTCGgtaagttgcagaatttgttgtCTCTGCGCTTATATTCAAATCAGTTATCTGGTGAGATTCCTAGTAGTTTAGGGCTAATTCCAAGTCTGAGTTTATTTAGGGTCTTCACCAATAAGTTAAATGGAACATTGCCTTCGGAATTTGGACGGTATTCAAAGCTTGCATATTTTGAAGTTGCTGAAAATCAACTCACTGGTGGGTTGCCAGAACATCTCTGTGATGGTGGTGCTTTGATAGGTGTGAGTGctttttcaaataatttcagTGGAAATTTACCAAAGTGGTTTGAGAATTGTGATTCTCTTACCACAATTAAGCTTAACAGTAACAGATTTTCAGGGGAAGTTCCTTTGGGTTTGTGGAGTTTGACGAAATTATCAACTTTGATGATAAGTGATAACTTCTTTTCTGGTAATCTTCCAAGTAAATTATCATGGAACATGTCTAGACTTGAGATTAGAAACAACAACTTTTCAGGTCCGATATCTGTTGGAATTTCTTCTGCTTTAAATTTGGTAGTTTTTGATGCAACAAACAATATGTTTTCTGGTGCGTTTCCAAAGGAATTAACGCGTTTATCACAGCTCATTACTCTCCATCTTGATGGTAATCAACTCTCTGGAAcacttccatcggagataattTCGTGGCAATCGCTTGATACTCTAACAATCTCAAGAAACAAAATTTCAGGTCAAATACCTGTTGCTATGTCTTCTCTTCCTAAACTTGTTTACTTGGATTTGTCTGAAAATAACATAAGTGGTGAAATCCCACCTCAGCTtgtgaaattgaattttatttttctcaacttgTCCTCCAACAAGCTTACCGGGAGCATCCCTGATGAGCTTGACAACCTTGCATATGAAACTAGTTTCTTGAACAATCCTCAACTGTGTACTCATAATGAAAATTTGAACCTTTCAAGCTGTTTGGCAAAAACCACACCACACTCCAGAAAACATTCATCTTTGAAATCAAAACTCGTTGCTCTGATTCTTGCTGTTACAGCCGCTGTGTTGCTGGCCACAACTTTTTTGGCCTTCTGTACGTTGAAAAAACGTTGCAGCAAAAAGCACTGTGGACCTAAGCTTTCAACATGGAGGCTTACCTCATTCCAAAGGCTAGATCTCACGGAAATAAATATCTTCTCAAGTTTGACAGATAATAACCTCATTGGAAGTGGAGGGTTTGGGAAAGTTTACCGGATAGCTTCAACTCGTCCCGGTGAGTATGTTGCAGTGAAGAAAATTTGGAATGTCAAAGATGTGGATGAAAAACTGGATAAAGAATTTATGGCTGAGGTTGAAATTCTGGGCAATATTAGGCATTCCAATATAGTGAAGcttttgtgttgtttttcaAGTGAGACCTCTAAACTTCTTGTTTATGAATACATGGAAAATCATAGCCTGGACAAATGGCTTCATACAAAGAAGATCAAAACATCAGTTAGTGGGTTGAGTTCACATACCGAGAATCAATTGGTATTGAGTTGGCCAACGAGATTGAACATTGCCATTGGTGCTGCACAAGGTCTGTGTTACATGCATCATGAATGTTCAGTGCCAATCATTCATAGAGATGTGAAGTCTAGCAATATACTGCTTGACTCTGAGTTCAAGGCAAGTATAGCAGATTTTGGACTCGCAAAGATGTTGGCGAAGAATGGGGAACCATATACCGCATCTGTTCTAGCAGGGTCTTTCGGGTACATTCCACCAGAATATGCATATTCAACCAGGATTGATGAGAAAGTTGATGTGTATAGTTTTGGAGTTGTGCTACTAGAGCTAGTGACAGGAAGAGAGCCTAATAATGGAGGCGACAATGCATGCAGTCTAGTTGATTGGGCATGGCAGCATTGTGATGAAGGGAAATGCATCACTGATTCCTTTGATAAGGTTATCAGAGAAACACGTTATACAGCAGAGATGACTTGCGTCTTCAAATTAGGCCTCATGTGCACAAGCACAGTACCCTCCACTAGGCCTTCCACAAAGGAGATTTTGCAAGTTCTTCGACAGTGCAGTTCAAGTTCTGCACGTAAAAGAGTGGCAACTGAGTTTGATATCACTCCTCTTCTTGGCAATACAACTTACATTTCCAGTTACAAGGATAGTAGGACTGTAAGTGAAAACGAAGAAAGCTGCTTATATAGCGTGTAA 3105 0.3932 MSKLPLFISKFSFLLFLLVNFIVPSLVISQATNTEVSILLNLKRQLGDPPSLQSWKPSSSSPCNWSEINCTGGSVTELLLPTKDITAQKLPSTICDLKNLTKLDLSNNSIAGEFPTWLQNCSNLQYLDLSQNYFAGQIPDDIGNIKSLTYLNLGGNSFIGDVPAAIGKLSKLQTLHLFRNNFNGTFPKEIGDLTNLEILGLAYSFKLKPMAIPVEFGKLKNLKYMWISQCNLIGNIPESFENLTNLEHLDLSTNNLTGNIPTNLFLLKNLNVLYLYLNRLTGEIPNSVQALNLTNIDLSMNNLTGSIPEEFGKLQNLLSLRLYSNQLSGEIPSSLGLIPSLSLFRVFTNKLNGTLPSEFGRYSKLAYFEVAENQLTGGLPEHLCDGGALIGVSAFSNNFSGNLPKWFENCDSLTTIKLNSNRFSGEVPLGLWSLTKLSTLMISDNFFSGNLPSKLSWNMSRLEIRNNNFSGPISVGISSALNLVVFDATNNMFSGAFPKELTRLSQLITLHLDGNQLSGTLPSEIISWQSLDTLTISRNKISGQIPVAMSSLPKLVYLDLSENNISGEIPPQLVKLNFIFLNLSSNKLTGSIPDELDNLAYETSFLNNPQLCTHNENLNLSSCLAKTTPHSRKHSSLKSKLVALILAVTAAVLLATTFLAFCTLKKRCSKKHCGPKLSTWRLTSFQRLDLTEINIFSSLTDNNLIGSGGFGKVYRIASTRPGEYVAVKKIWNVKDVDEKLDKEFMAEVEILGNIRHSNIVKLLCCFSSETSKLLVYEYMENHSLDKWLHTKKIKTSVSGLSSHTENQLVLSWPTRLNIAIGAAQGLCYMHHECSVPIIHRDVKSSNILLDSEFKASIADFGLAKMLAKNGEPYTASVLAGSFGYIPPEYAYSTRIDEKVDVYSFGVVLLELVTGREPNNGGDNACSLVDWAWQHCDEGKCITDSFDKVIRETRYTAEMTCVFKLGLMCTSTVPSTRPSTKEILQVLRQCSSSSARKRVATEFDITPLLGNTTYISSYKDSRTVSENEESCLYSV 1034
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00417 1034 SMART LRR_typ_2 314 338 IPR003591 -
Tsu07g00417 1034 SMART LRR_typ_2 97 120 IPR003591 -
Tsu07g00417 1034 SMART LRR_typ_2 243 267 IPR003591 -
Tsu07g00417 1034 SMART LRR_typ_2 504 528 IPR003591 -
Tsu07g00417 1034 SMART LRR_typ_2 434 458 IPR003591 -
Tsu07g00417 1034 SMART LRR_typ_2 169 193 IPR003591 -
Tsu07g00417 1034 SMART LRR_typ_2 552 576 IPR003591 -
Tsu07g00417 1034 Gene3D Phosphorylase Kinase; domain 1 681 778 - -
Tsu07g00417 1034 Gene3D Ribonuclease Inhibitor 385 457 IPR032675 -
Tsu07g00417 1034 PRINTS Leucine-rich repeat signature 100 113 - -
Tsu07g00417 1034 PRINTS Leucine-rich repeat signature 243 256 - -
Tsu07g00417 1034 SUPERFAMILY L domain-like 46 380 - -
Tsu07g00417 1034 CDD STKc_IRAK 705 986 - -
Tsu07g00417 1034 Gene3D Ribonuclease Inhibitor 458 646 IPR032675 -
Tsu07g00417 1034 Gene3D Transferase(Phosphotransferase) domain 1 779 1007 - -
Tsu07g00417 1034 Gene3D Ribonuclease Inhibitor 31 185 IPR032675 -
Tsu07g00417 1034 ProSiteProfiles Leucine-rich repeat profile. 245 267 IPR001611 GO:0005515
Tsu07g00417 1034 PANTHER KINASE FAMILY WITH LEUCINE-RICH REPEAT DOMAIN-CONTAINING PROTEIN 17 1002 - -
Tsu07g00417 1034 Pfam Leucine Rich Repeat 221 243 IPR001611 GO:0005515
Tsu07g00417 1034 ProSitePatterns Serine/Threonine protein kinases active-site signature. 837 849 IPR008271 GO:0004672|GO:0006468
Tsu07g00417 1034 SUPERFAMILY L domain-like 373 598 - -
Tsu07g00417 1034 Pfam Leucine rich repeat 99 157 IPR001611 GO:0005515
Tsu07g00417 1034 Gene3D Ribonuclease Inhibitor 291 384 IPR032675 -
Tsu07g00417 1034 Gene3D Ribonuclease Inhibitor 186 290 IPR032675 -
Tsu07g00417 1034 ProSiteProfiles Protein kinase domain profile. 699 1008 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00417 1034 Pfam Protein kinase domain 701 984 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00417 1034 Pfam Leucine rich repeat N-terminal domain 33 70 IPR013210 -
Tsu07g00417 1034 SUPERFAMILY Protein kinase-like (PK-like) 692 986 IPR011009 -
Tsu07g00417 1034 SMART serkin_6 699 986 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00417 1034 PANTHER RECEPTOR KINASE-LIKE PROTEIN XA21 17 1002 - -
Tsu07g00417 1034 ProSitePatterns Protein kinases ATP-binding region signature. 705 729 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00417 Tsu-Chr7 3210116 3213305 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00417 23 1027 Receptor kinase-like Gene Family AT5G25930 54.861 0.0 1048
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tsu07g00417 Pkinase 4.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00417 K00924 - adu:107461025 1340.48
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00417 07 3210116 3213305 Tsu07g00417 07 3210116 3213305 ECH