Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00389 ATGTTTTCTTCGCgaattttttctcttctccttcttctcttctcaCTACTCACAATCGCCAAATCAAACGAGCGTGAAATTCTACTTAACCTAAAATCCTCCCTCCAAAATTCAAACAACGAACTCATCTTCAACTCATGGAATGCAAACAGTTCCATTTGCAGTTTCCATGGAATCACCTGCAACTCATTCAATTCTGTTACAGAAATCAACCTTCCCAGAACAAATCTCACAGGAATTCTTCCAATAGATTCACTCTGCAATCTTCAATCTCTCACCAAACTCGTTTTAGGTTTCAACAATTTCACTGGCAGAGTCAATGAAAGCCTTAGAAACTGTGTCAATCTACAATTCTTAGATTTAGGAAACAACATTTTCTCTGGACCTTTTCCAGATATTTCacctcttcatcatcttcaatatCTCTATGTAAACAGAAGTGGTTTTTCTGGTACTTTTCCGTGGCAATCTCTGTTAAATATAACAGGTTTGTTACAGTTAAGCGTCGGAGATAATCCTTTTGATCTAACGCCGTTTCCTACCGAGGTGTTAAGTCTCAAGAAATTGAACTGGCTTTACATGAGTAACTGTAATATCGGAGGAACGTTACCGGTTGGACTCGGTAACTTAACGGAGTTAACTGAATTAGAATTCTCCGATAACTTTATTACCGGAGAACTTCCTGGTGATATAGTCAATCTTAAGAAACTCTGGCAGCTTGAATTCTACAACAATTCGATAACCGGAGAAATTCCGATCGGGTTGAGAAACTTAACCGGACTCAAGAATTTCGATGGATCAATGAATCAATTAGAAGGAAATCTCTCTGAGGTAAGGTTTTTAACCAATCTAGTTTCGCTACAATTCTTCGAAAACAAATTATCCGGCGAGATTCCACCGGAGTTTGGCGAATTCAAAAACCTTGTGCAATTGTCTCTCTATAGAAACAATTTAACAGGTCCAATTCCTCAGAAGATTGGTTCATGGTCAGAATTTTCGTACATCGACGTTTCGGAGAATTTCTTAACAGGTTCAATTCCTCCAGATATGTGCAACAAAGGAAAGTTGATTTATCTTCTCGTACTTCAGAATAATCTCACCGGCCAGATACCGGAAAGTTACGGTACCTGTTCGAGTCTTCAAAGACTCAGAGTGAGTAGAAACTCGCTCTCAGGTACCGTTCCTTCCGGTATCTGGGGATTACCGATGGTTGAAATAGTTGATATTGAATCGAATCAGTTTGAAGGTTCTGTTAGTTCAGAGATCCAAAACGCGAAAAAATTAGCAACTATATTTGCAAGAAACAACCGTTTAACCGGTGAAATACCAGTAGAGATTTCAAAAACGACGTCGTTGGTGACAATTGATCTTAGCGAGAATCAAATTTCCGGGAACATTCCAGAAGGAATTGGAGAACTTAAACAACTTAGTATACTTTATTTACAGGGAAATAAATTCTCAGGGGTAATTCCGGAATCTTTGGGTTATTGTAAATCACTCAACAACATTGATTTGTCGAGAAATTTACTTTCGGATGAAATTCCGGCGAGTTTAGGTTTGTTACCAGCTTTGAATTCTCTGAATTTCTCTCGGAATGAACTTTCCGGTGAAATTCCGGAGAGTTTAGGTTCACTTAAGTTGAGTCTGTTTGATCTTTCGCATAATCGATTATCCGGTAAAATTCCACAAGCTTTGACTATTCAAGCTTACAACGGAAGCCTCACCGGAAATCCACGTTTGTGCACACTCGACGATATTGGTTCTTTCCGGCGTTGTTCTGAGAGCAATGGAATGTCGAAAGACGTTCGTGCCCTTTTACTTTGTTTCATAGTAgctttggttttgattttttgttttttgggtgtttatttgaaattgaagaaaatgaaggggaaagaggaaaaaagagaGGGAAATAAATATGGAAGAGAACGTTCTTTGAAGGAAGAATCATGGGATGTGAAATCGTTCCACGTGTTGAGTTTCAGTGAAGATGAGATTCTTGATTCTGTTAAGCAAGAGAATCTAATAGGAAAAGGAGGTTCAGGAAATGTTTATAGAGTAACACTTGCAAATGGAAAAGAACTTGCGGTTAAACATATATGGAACACCGATTTCGGGTCAAGGAAAAAGTCGTGGAGCAGCACACCGATGTTGGCAAAGCGCGTTGGTGGTGGTAGTTCGAGATCTAAGGAGTTTGACGCGGAGGTTCAAGCGTTGAGTTCGATAAGACATGTGAATGTGGTGAAGCTTTATTGTAGTATAACTAGTGAGGATTCAAGTCTTTTGGTTTATGAGTATTTGCCTAATGGAAGTTTGTGGGATAGGCTTCATACTAATGGAAAGATGGAGCTTGATTGGGAAACAAGATATGAAATCGCGGTTGGTGCTGCTAAAGGGTTGGAGTATTTACATCATGGGTGTGAAAGACCTGTGATTCATAGAGATGTTAAGTCAAGTAACATTTTGTTGGATGAGTTTTTGAAACCTAGGATTGCTGATTTTGGTCTTGCTAAGATTGTTAACGCTAATGCTATTAAGGATTCTACTCATATCATTGCCGGTACTCACGGCTACATCGCTCCTGAATATGGATACACATACAGAGTGAATGAGAAAAGTGATGTGTATAGTTTTGGAGTGGTATTGATGGAGTTAGTAACAGGTAAAAGGCCAAGTGAAACAGAATTCGGAGAAAACAAGGACATAGTTAGTTGGGTTCATGGGAAGACAAGGAGCAAGGAGAAGTTTATGAGTGTGGTCGATTCGAGAATTCCGGAGATGTATAAAGAGGAAGCTTGTAAGGTATTGAGAACTGCAGTTCTTTGTACAGCAACTCTTCCAGCTATGAGACCAAGTATGAGAGCTGTGGTTCAAAAACTTGAGGATGCTGCACCTTGTAAATTGGTTGGAATTGTCATTAGTAAAGATGGGAGTGAAAAGAAAATTGGAGTCAATGACAAATGA 2967 0.3765 MFSSRIFSLLLLLFSLLTIAKSNEREILLNLKSSLQNSNNELIFNSWNANSSICSFHGITCNSFNSVTEINLPRTNLTGILPIDSLCNLQSLTKLVLGFNNFTGRVNESLRNCVNLQFLDLGNNIFSGPFPDISPLHHLQYLYVNRSGFSGTFPWQSLLNITGLLQLSVGDNPFDLTPFPTEVLSLKKLNWLYMSNCNIGGTLPVGLGNLTELTELEFSDNFITGELPGDIVNLKKLWQLEFYNNSITGEIPIGLRNLTGLKNFDGSMNQLEGNLSEVRFLTNLVSLQFFENKLSGEIPPEFGEFKNLVQLSLYRNNLTGPIPQKIGSWSEFSYIDVSENFLTGSIPPDMCNKGKLIYLLVLQNNLTGQIPESYGTCSSLQRLRVSRNSLSGTVPSGIWGLPMVEIVDIESNQFEGSVSSEIQNAKKLATIFARNNRLTGEIPVEISKTTSLVTIDLSENQISGNIPEGIGELKQLSILYLQGNKFSGVIPESLGYCKSLNNIDLSRNLLSDEIPASLGLLPALNSLNFSRNELSGEIPESLGSLKLSLFDLSHNRLSGKIPQALTIQAYNGSLTGNPRLCTLDDIGSFRRCSESNGMSKDVRALLLCFIVALVLIFCFLGVYLKLKKMKGKEEKREGNKYGRERSLKEESWDVKSFHVLSFSEDEILDSVKQENLIGKGGSGNVYRVTLANGKELAVKHIWNTDFGSRKKSWSSTPMLAKRVGGGSSRSKEFDAEVQALSSIRHVNVVKLYCSITSEDSSLLVYEYLPNGSLWDRLHTNGKMELDWETRYEIAVGAAKGLEYLHHGCERPVIHRDVKSSNILLDEFLKPRIADFGLAKIVNANAIKDSTHIIAGTHGYIAPEYGYTYRVNEKSDVYSFGVVLMELVTGKRPSETEFGENKDIVSWVHGKTRSKEKFMSVVDSRIPEMYKEEACKVLRTAVLCTATLPAMRPSMRAVVQKLEDAAPCKLVGIVISKDGSEKKIGVNDK 988
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00389 988 ProSitePatterns Protein kinases ATP-binding region signature. 677 699 IPR017441 GO:0005524
Tsu07g00389 988 Gene3D Phosphorylase Kinase; domain 1 654 767 - -
Tsu07g00389 988 Gene3D Ribonuclease Inhibitor 334 585 IPR032675 -
Tsu07g00389 988 SUPERFAMILY L domain-like 277 591 - -
Tsu07g00389 988 ProSitePatterns Serine/Threonine protein kinases active-site signature. 812 824 IPR008271 GO:0004672|GO:0006468
Tsu07g00389 988 Gene3D Ribonuclease Inhibitor 102 329 IPR032675 -
Tsu07g00389 988 Pfam Leucine rich repeat N-terminal domain 23 62 IPR013210 -
Tsu07g00389 988 Pfam Protein kinase domain 673 959 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00389 988 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 9 973 - -
Tsu07g00389 988 SUPERFAMILY Protein kinase-like (PK-like) 664 961 IPR011009 -
Tsu07g00389 988 Gene3D Transferase(Phosphotransferase) domain 1 768 969 - -
Tsu07g00389 988 ProSiteProfiles Protein kinase domain profile. 671 965 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00389 988 SMART serkin_6 671 968 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00389 988 PANTHER RECEPTOR-LIKE PROTEIN KINASE 7 9 973 - -
Tsu07g00389 988 Gene3D Ribonuclease Inhibitor 17 101 IPR032675 -
Tsu07g00389 988 SUPERFAMILY L domain-like 49 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00389 Tsu-Chr7 2976696 2980178 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00389 11 981 Receptor kinase-like Gene Family AT1G09970 59.221 0.0 1129
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Tsu07g00389 Pkinase 3.2e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00389 - - gmx:100779554 1492.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00389 07 2976696 2980178 Tsu07g00389 07 2976696 2980178 ECH