Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00388 ATGCCGAATCCAGAAACTCACCGTCAACACAATCGCCAACCTCACCACTCCAAAACTCGACCCTCATCTTCATCAGTTCGAACCAAACCTCGATCCAAATCCAGAGTTCCTCTTACTAAATTACTCCGAGTAGCCTCAGTTGCCGGTGGGATTCAATTTGGATGGGCTTTACAACTCTCTCTTCTAACTCCCTATGTTCAACAGCTTGGAATCCCGCACGCTTGGGCTAGCATTATATGGCTCTGTGGGCCACTTTCTGGCCTTCTCGTTCAACCATTGGTTGGACATTTAAGTGATCGGTGTACTAGTCGATTCGGTCGTCGGAGACCGTTTATTTTCGGTGGTGCCATATCGATAGTTATCTCTGTTCTTATAATTGGTCATGCTGCTGATTTGGGATGGAAATTTGGTGATACAAAGGAACATCGACGTTCCGCGGTGGGGTTTTTTGTCTTCgggttttggattttggatgttGCTAATAATGTTACTCAGGGTCCTTGTAGAGCATTGCTTGGTGATCTCACTGGTAAGGATCACCGAAGGACACGTGTCGCAAATGCTTATTTCTCCTTATTTATGGCTATTGGTAACATTCTTGGATATGCAACTGGATCATACAGTGGTTGGTACAAGGTCTTTCCTTTCACGCTTACCCCTGCATGCAATATTAGTTGTGCGAATCTCAAGTCTGCTTTCTTTCTGGACATTATTTTCATTCTGATCACCACCTATATCAGTATCATGGCAGCTAATGAGGTGCCTCTAGGGTCAAGTGGGGAAGCCAGTGCTGAAGCAGCAGAGTCAGGTGGTAGTGCGGAAGAAGCTTTCCTGTGGGAGCTATTTGGGACATTCAGATATTTTTCAAAGCCTATATGGGTAATATTGTCTGTTACTGCTCTAACATGGATTGGGTGGTTTCCATTTCTTCTATTCGATACCGATTGGATGGGCCGAGAAATTTATGGCGGTGAGCCAAATAGAGGCGCTAATTATGATACCGGAGTTAGAATGGGGGCGCTTGGTTTATTGCTTAATTCAGTTGTTCTTGGAATAACGTCATTACTCATGGAGAGGCTATGCAGGAAGCGGGGGCCTGGGTTTGTGTGGGGAGTCGCAAACATCCTAATGGCCATCTGCTTTGTAGCAATGCTTGTATTAACCTATGTGGCAAATACCATTGGTTATTTAGGCAAAGATCTACCGCCCACCAGAATCGTGATATATGCACTGACAATCTTTACCATTCTCGGGTTTCCACTGGCAATCACTTACAGTGTTCCATATGCCTTAATTTCTACGCATATTCAGTCATTGGGGCTCGGCCAAGGATTGTCAATGGGAGTGCTAAATCTTGCAATCGTGTTGCCACAGATGGTAGTGTCCTTAGGAAGTGGACCATGGGATCAGTTATTTGGTGGAGGAAACTCTCCAGCCTTTGCTGTGGCAGCGGTTGCAGCCCTTGTCAGTGGACTCATAGCTGTCTTGGCTATTCCCCGAACCGGTGCTCAAAAGTCTAGAAGCCCAGTATGA 1533 0.4521 MPNPETHRQHNRQPHHSKTRPSSSSVRTKPRSKSRVPLTKLLRVASVAGGIQFGWALQLSLLTPYVQQLGIPHAWASIIWLCGPLSGLLVQPLVGHLSDRCTSRFGRRRPFIFGGAISIVISVLIIGHAADLGWKFGDTKEHRRSAVGFFVFGFWILDVANNVTQGPCRALLGDLTGKDHRRTRVANAYFSLFMAIGNILGYATGSYSGWYKVFPFTLTPACNISCANLKSAFFLDIIFILITTYISIMAANEVPLGSSGEASAEAAESGGSAEEAFLWELFGTFRYFSKPIWVILSVTALTWIGWFPFLLFDTDWMGREIYGGEPNRGANYDTGVRMGALGLLLNSVVLGITSLLMERLCRKRGPGFVWGVANILMAICFVAMLVLTYVANTIGYLGKDLPPTRIVIYALTIFTILGFPLAITYSVPYALISTHIQSLGLGQGLSMGVLNLAIVLPQMVVSLGSGPWDQLFGGGNSPAFAVAAVAALVSGLIAVLAIPRTGAQKSRSPV 510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00388 510 MobiDBLite consensus disorder prediction 1 35 - -
Tsu07g00388 510 CDD MFS_SLC45_SUC 41 477 - -
Tsu07g00388 510 Gene3D MFS general substrate transporter like domains 287 506 IPR036259 -
Tsu07g00388 510 Gene3D MFS general substrate transporter like domains 39 255 IPR036259 -
Tsu07g00388 510 SUPERFAMILY MFS general substrate transporter 41 502 IPR036259 -
Tsu07g00388 510 MobiDBLite consensus disorder prediction 18 32 - -
Tsu07g00388 510 TIGRFAM GPH_sucrose: sucrose/H+ symporter 36 501 IPR005989 GO:0005887|GO:0008515|GO:0015770
Tsu07g00388 510 Pfam MFS/sugar transport protein 56 434 - -
Tsu07g00388 510 PANTHER SUGAR TRANSPORTER 13 508 - -
Tsu07g00388 510 PANTHER SUCROSE/H+ SYMPORTER, PLANT, MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED 13 508 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00388 Tsu-Chr7 2952452 2958129 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00388 1 505 Sucrose Transporter Gene Family AT1G09960 67.843 0.0 679
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00388 K15378 - gmx:100787939 804.283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00388 07 2952452 2958129 Tsu07g00388 07 2952452 2958129 ECH