Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00365 ATGATCACAAAACACTCACTTCTAATCCTTTTATTATCACTAATCTTTCTTCCAATAATCAAATGTCAAGTTAATTACACCGAGTGCCAGCAATCATGTGGTTCATCAAAACCCTTCCCTTACCCATTCGGATTCTCTTCCGGTTGCCAAATTCAACTAAACTGCACCGTCCACGGCAGAATCTTCATCGGAGAATTTCCAGTTCAATCGGTAAACTCAAACAATATAATAGTGAAAATCGAATCGCAATGTAATCGTCGATTTGAAACCTTTCATCAACTCTTCAGTCACAAATACGCACCTACTTCAGGAAACGTGATTCTGTTACAGAATTGTAGTGAAAATCGATCGCCTTGTATGATACCGGAGACTCTGCTTCCTACTCAATTCAAATCTGAATCTGACGGTTGCAACAACAACGCCTCTGGCGGCGGCGGCGGAGGGAAATTGAGTTgttacattgaaaataataagaGAGGTTTCGTGAATGAGACAAAATTGAAGCGGAACGGGTGTAAGTACTTTATATCGTCGATTTCATCGGAAAGATTGAGAAACAGTTCGGATTCGGCGGTTTCTTTGGAAGTAGCTACGATTGAGCTGGGATGGTGGCTTCATGGAGATCAGTGTCTTTGTTCTGATCATGCTAATTGTACTCAAATTAGGTCACCGATTGATGGAAAGCCTGGGTTTCGATGTCGATGTAATGAAGGATTCGCCGGCGATGGGTTTTTGGCCGGAAATGGCTGCTGGAAAGCCTCATCAACATGCAACCCAGCAAAGTACATGTCCGGAAGATGTGGAGGAAATGCAAGATTCATTGTCTTAATTGGAGGATTTATTTTTGGTGTATCATTGATGGTTGCTCTGGGTTCAGTATGTTGTTACTTTCGCCGACGCACCAAATTGAGAGTCACAAAGAGCACAAAACGACGCTTCACTGAAACTACTAACAATTACAGTGTTCCTATCTATCCCTACAAAGACATAGAAAAAGCTACAAATAGTTTTTCAGAGAAACAAAGATTGGGAACAGGAGCATATGGTACAGTTTATTCTGGAAAACTTTACAACGATGAATATGTCGCCATCAAAAGAATAAAACACAGAGACAATGAAAGCATTGAACAAGTCATGAATGAGATCAAACTCATTTCCTCTGTTAGTCACCCCAATTTAGTGCGCTTGTTGGGTTGTTCAATTGAATATGGAGAACAAATCTTAGTGTATGAGTTCATGCCCAATGGAACACTAAATCAGCATTTACAAAGAGAGAAAGGGAGTGGACTTTCATGGCCTGTTAGACTCAAAATTGCAACAGAAACAGCACAAGCTATAGCTCATCTTCATTCAGCAATTAATCCACCTATTTACCATAGAGATATCAAATCAAGTAACATACTTTTGGACCAAAACTTTGGATccaaagtagcagattttgggCTTTCGAGACTAGGAATAACTGAAATATCTCATGTTTCTCATGTTTCAACTGCCCCACAAGGAACACCTGGCTATGTTGACCCACAATACCATCAAGACTTTCACCTTTCTGATAAAAGCGATGTATATAGCTTTGGTGTTGTTCTTGTTGAGATAATAACAGGGCTAAAAGTAGTTGATTTTTCTCGTCCTGATAATGAAGTGAATCTGGCTTCTCTTGCTGTTGACAGGATCAGAAAAGGGCTTTTAGAAGATATTATAGACCCAATTGTGTTTCTTGACCCCCAAGCAACCAATGATGGTTGGATACTTTCTTCCATACACAAGGTAGCTGAGTTGGCATTCAGATGTCTTGCATTTCACAGGGATATGAGACCTTGTATGACAGAAGTGGCAACTGAGTTAGAGCAGTTAAGTTTGAATCAGTGGAGCTCTTTTGGAGAAAACAGCTCTATTATAGATCACTtgtcttcttgttcttcttcttcttcttctagtgAAAGTGAGAAACCATTGAGCAGCAACACCACATTGAAGGATGTTGGGCCTAAGGGTAAATGTGATCTTAAGCCGGAGAATGTGCCTGTTTCTTTTAAATTAGTTGATAGGCTCAATAGTAACTCACCCCTTTCGGTGCAGGATCCAGACCTATGGTTTAGTGAGCAAAGCTCTCCTTCGTCAAATAGTCTCCCCAGTAAGTCATTTGATCATGGATCTGTTTCATATGGTCAACAAGCTAGTTTGTAG 2190 0.3909 MITKHSLLILLLSLIFLPIIKCQVNYTECQQSCGSSKPFPYPFGFSSGCQIQLNCTVHGRIFIGEFPVQSVNSNNIIVKIESQCNRRFETFHQLFSHKYAPTSGNVILLQNCSENRSPCMIPETLLPTQFKSESDGCNNNASGGGGGGKLSCYIENNKRGFVNETKLKRNGCKYFISSISSERLRNSSDSAVSLEVATIELGWWLHGDQCLCSDHANCTQIRSPIDGKPGFRCRCNEGFAGDGFLAGNGCWKASSTCNPAKYMSGRCGGNARFIVLIGGFIFGVSLMVALGSVCCYFRRRTKLRVTKSTKRRFTETTNNYSVPIYPYKDIEKATNSFSEKQRLGTGAYGTVYSGKLYNDEYVAIKRIKHRDNESIEQVMNEIKLISSVSHPNLVRLLGCSIEYGEQILVYEFMPNGTLNQHLQREKGSGLSWPVRLKIATETAQAIAHLHSAINPPIYHRDIKSSNILLDQNFGSKVADFGLSRLGITEISHVSHVSTAPQGTPGYVDPQYHQDFHLSDKSDVYSFGVVLVEIITGLKVVDFSRPDNEVNLASLAVDRIRKGLLEDIIDPIVFLDPQATNDGWILSSIHKVAELAFRCLAFHRDMRPCMTEVATELEQLSLNQWSSFGENSSIIDHLSSCSSSSSSSESEKPLSSNTTLKDVGPKGKCDLKPENVPVSFKLVDRLNSNSPLSVQDPDLWFSEQSSPSSNSLPSKSFDHGSVSYGQQASL 729
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00365 729 ProSitePatterns Protein kinases ATP-binding region signature. 343 365 IPR017441 GO:0005524
Tsu07g00365 729 SUPERFAMILY Protein kinase-like (PK-like) 312 617 IPR011009 -
Tsu07g00365 729 Pfam Protein kinase domain 337 612 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00365 729 MobiDBLite consensus disorder prediction 696 729 - -
Tsu07g00365 729 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 14 21 648 - -
Tsu07g00365 729 CDD STKc_IRAK 343 619 - -
Tsu07g00365 729 SMART serkin_6 337 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00365 729 MobiDBLite consensus disorder prediction 643 669 - -
Tsu07g00365 729 ProSitePatterns Serine/Threonine protein kinases active-site signature. 457 469 IPR008271 GO:0004672|GO:0006468
Tsu07g00365 729 Gene3D Transferase(Phosphotransferase) domain 1 413 638 - -
Tsu07g00365 729 Gene3D Phosphorylase Kinase; domain 1 297 412 - -
Tsu07g00365 729 Gene3D Laminin 211 245 - -
Tsu07g00365 729 MobiDBLite consensus disorder prediction 643 661 - -
Tsu07g00365 729 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 21 648 IPR045274 GO:0007166
Tsu07g00365 729 ProSiteProfiles Protein kinase domain profile. 337 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00365 Tsu-Chr7 2741613 2746642 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00365 10 711 Receptor kinase-like Gene Family AT2G23450 49.721 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Tsu07g00365 Pkinase 8.7e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00365 - - mtr:MTR_3g111510 1211.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00365 07 2741613 2746642 Tsu07g00365 07 2741613 2746642 ECH