Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00348 ATGTCTAAACGCTTCAAGATGAAATTTACAATCCCTTCTTTTCAAATGTGTCGCTCCGATGATCTTTCCTCTTTTCCGGTAAATCCTGTTCCGGCTATATACCGTCTTTCTCCTGTAAACTCCAAAGCACATGACATAGGGTATCCTAATCCTAACATCTCTGCTACGTCACCCTCGTCATCACCGGAACAACAATGCAAAGTGTCCTCAAAGATCAAGAAAGTGAAATCCAGAGGCCGAAAAAGTACCTCTGATGTTCCATCGAGAAAGAGCGAGTTTCTAATGGATAAAATCAATGAAGAAGAGAGTGAAAGTCTGATTTCTTGCATGTCAAGATTCTCCGAAGACCATAAGGTACATTCTTCGAGTTCTTCTAGTACTATGGATAGTGAAGTTAGACCCGATCCAAATTCTgataataaaaaagagaataCAAATTTAATAAGCACGGATAGAAGGGCGATATGTAGTGTTAAGAAGATCGAGAGAGTGAGGTTTCAAAGTACTATGGAGAATCGAAGAGGAGTAGAAACGAAGGTTATGTCAAGTAGAATGGAGGAGAGGGTAAAAGAAAGTTTTGCTTTGGTGAAAAAATCAAAGGATCCTTATGAAGACTTCAAGAAGTCAATGCTAGAGATGATAGAAGAGATGGAAATGTATGAGGCTAAGGACTTGGAACAACTATTGCAGTGTTTTTTGGCCTTGAATTCTAGGGATTATCATGGAGTAATTGTGAGAGCTTTCATGGAGATTTGGCAACAAATGTTTGTTTGGAATCCAAAGTCAACTAAAAATCTTCAAACAAATGTTCAAAGTACGGATGTAGAAAAGTAG 834 0.3789 MSKRFKMKFTIPSFQMCRSDDLSSFPVNPVPAIYRLSPVNSKAHDIGYPNPNISATSPSSSPEQQCKVSSKIKKVKSRGRKSTSDVPSRKSEFLMDKINEEESESLISCMSRFSEDHKVHSSSSSSTMDSEVRPDPNSDNKKENTNLISTDRRAICSVKKIERVRFQSTMENRRGVETKVMSSRMEERVKESFALVKKSKDPYEDFKKSMLEMIEEMEMYEAKDLEQLLQCFLALNSRDYHGVIVRAFMEIWQQMFVWNPKSTKNLQTNVQSTDVEK 277
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00348 277 PANTHER TRANSCRIPTION REPRESSOR OFP7 57 264 - -
Tsu07g00348 277 PANTHER TRANSCRIPTION REPRESSOR OFP7 1 51 - -
Tsu07g00348 277 Coils Coil 203 223 - -
Tsu07g00348 277 MobiDBLite consensus disorder prediction 50 68 - -
Tsu07g00348 277 MobiDBLite consensus disorder prediction 41 96 - -
Tsu07g00348 277 ProSiteProfiles OVATE domain profile. 195 254 IPR006458 -
Tsu07g00348 277 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 57 264 IPR038933 GO:0045892
Tsu07g00348 277 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 1 51 IPR038933 GO:0045892
Tsu07g00348 277 TIGRFAM A_thal_3678: uncharacterized plant-specific domain TIGR01568 194 255 IPR006458 -
Tsu07g00348 277 MobiDBLite consensus disorder prediction 134 148 - -
Tsu07g00348 277 MobiDBLite consensus disorder prediction 117 148 - -
Tsu07g00348 277 MobiDBLite consensus disorder prediction 79 96 - -
Tsu07g00348 277 Pfam Transcriptional repressor, ovate 199 256 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00348 Tsu-Chr7 2612937 2613770 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Tsu07g00348 Ovate 1.9e-24 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00348 - - gmx:102662518 269.626
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00348 07 2612937 2613770 Tsu07g00348 07 2612937 2613770 ECH