Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00333 ATGGGTTGGacaagagaagaaaataggCGTTTTGAGGATGCACTTGCAGTATATGGTCCAGAAGATCCAAATAGGTGGCAACATGTAGCTAATGCTGTTGGTGGAAAATCTGTAAAAGAGGTGAAAATGCACTATGAGATCCTTAAGGAAGATCTCATTCGAATTGAGCGTGATCAAATACCACTACCTACTTACAGGGGGGGTGCTGGTATCAATATCAACAATGGAAGGCAATTTTTTGGTGATGAACAAAGGCGAATGAGAAATCTTAATATCCACTGA 282 0.383 MGWTREENRRFEDALAVYGPEDPNRWQHVANAVGGKSVKEVKMHYEILKEDLIRIERDQIPLPTYRGGAGININNGRQFFGDEQRRMRNLNIH 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00333 93 Gene3D - 2 50 - -
Tsu07g00333 93 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 1 53 IPR017930 -
Tsu07g00333 93 ProSiteProfiles SANT domain profile. 1 53 IPR017884 -
Tsu07g00333 93 CDD SANT 3 49 IPR001005 -
Tsu07g00333 93 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 2 66 IPR044636 GO:0003700
Tsu07g00333 93 Pfam Myb-like DNA-binding domain 3 45 IPR001005 -
Tsu07g00333 93 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 2 66 - -
Tsu07g00333 93 SUPERFAMILY Homeodomain-like 3 56 IPR009057 -
Tsu07g00333 93 ProSiteProfiles Myb-like domain profile. 1 49 IPR001005 -
Tsu07g00333 93 Coils Coil 38 58 - -
Tsu07g00333 93 SMART sant 3 51 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00333 Tsu-Chr7 2537064 2539296 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Tsu07g00333 Myb_DNA-binding 5.8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00333 - - gmx:100789698 148.288