Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00316 ATGGCGACTCCGGTTGAGCCACCAAATGGGATTAGAGCTGAAGGGAAGCATTATTTTTCCATGTGGCAAACCCTTTTTGAGATTGATACTAAATATGTGCCGATTAAGCCAATTGGTCGAGGAGCATATGGAATTGTTTGTTCTTCTGTCAATAGAGAAACCAATGAGAAAGTTGCCATCAAGAAGATACAGAATGCGTTTGAGAATCGCGTTGATGCGCTTAGAACTTTGCGTGAACTGAAACTTCTTCGACATCTTCACCATGAGAATGTTATTGCCTTGAAAGACATCATGATGCCCATTCAGAGGAATAGTTTTAAGGATGTTTATCTTGTTTATGAACTCATGGACACGGATTTGCATCAGATTATTAAGTCTTCCCAAGCATTGTCTAATGATCATTGCCAATATTTCCTCTTTCagTTGCTTCGGGGCTTGAAATATCTTCACTCAGCTAACATCCTTCATCGTGACTTGAAACCTGGGAATCTTCTAATTAATGCAAATTGTGACCTAAAAATATGTGATTTTGGGTTGGCACGCACCAACTGCAGCAAGAACCAGTTCATGACGGAGTATGTTGTCACTCGGTGGTATAGGGCACCAGAACTCCTACTTTGCTGTGACAACTATGGGACATCTATTGATGTATGGTCCGTGGGATGCATCTTTGCTGAGCTTCTTGGACGAAAACCTATTTTCCCTGGTTCAGAGTGCCTCAACCAACTAAAACTTATTATCAATATCCTTGGTAGTCAAAGGGAGGAGGATATTGAATTTATTGATAATCCAAAGGCAAAGAGGTACATCAAATCGCTTCCATATTCTCTTGGAACCCCCTTTTCCAGACTTTACCCCAATGCACATCCATTGGCAATTGATCTACTGGCAAAGATGCTTGTTTTTGATCCCACAAAGAGGATTAGTGTCACGGAAGCGCTTCAACACCCTTTCATGGCCTCTCTCTATGATCCTAATTGTGACCCTCCTGCCATCATTCCAATTGATCTTGACATTGATGAGGATCTAGGGGAAGAGGTGATAAGGGAGTTGATGTGGAAGGAAATGGTTCATTACCATCCTGAATCTGCTTTGGGAAATGCAGAGTTATGcccttaa 1119 0.4129 MATPVEPPNGIRAEGKHYFSMWQTLFEIDTKYVPIKPIGRGAYGIVCSSVNRETNEKVAIKKIQNAFENRVDALRTLRELKLLRHLHHENVIALKDIMMPIQRNSFKDVYLVYELMDTDLHQIIKSSQALSNDHCQYFLFQLLRGLKYLHSANILHRDLKPGNLLINANCDLKICDFGLARTNCSKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSVGCIFAELLGRKPIFPGSECLNQLKLIINILGSQREEDIEFIDNPKAKRYIKSLPYSLGTPFSRLYPNAHPLAIDLLAKMLVFDPTKRISVTEALQHPFMASLYDPNCDPPAIIPIDLDIDEDLGEEVIRELMWKEMVHYHPESALGNAELCP 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00316 372 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 12 366 - -
Tsu07g00316 372 Gene3D Transferase(Phosphotransferase) domain 1 116 345 - -
Tsu07g00316 372 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 12 366 - -
Tsu07g00316 372 CDD STKc_TEY_MAPK 26 361 - -
Tsu07g00316 372 Pfam Protein kinase domain 33 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00316 372 ProSitePatterns MAP kinase signature. 67 170 IPR003527 GO:0004707|GO:0005524|GO:0006468
Tsu07g00316 372 ProSitePatterns Protein kinases ATP-binding region signature. 38 62 IPR017441 GO:0005524
Tsu07g00316 372 SUPERFAMILY Protein kinase-like (PK-like) 24 326 IPR011009 -
Tsu07g00316 372 Gene3D Phosphorylase Kinase; domain 1 19 355 - -
Tsu07g00316 372 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Tsu07g00316 372 SMART serkin_6 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00316 372 ProSiteProfiles Protein kinase domain profile. 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00316 Tsu-Chr7 2432130 2434616 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00316 1 370 MAP Kinase Gene Family AT1G10210 84.865 0.0 670
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Tsu07g00316 Pkinase 2.8e-71 CL0016