Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00312 ATGGCGACTCCGGTTGAGCCACCAAATGGGACAAGAGTTGAAGGGAAGCATTATTTTTCCATGTGGCAAACCGTTTTTGAGATTGATACCAAATATGTGCCGATTAAGCCGATTGGTCGAGGAACGTATGGGATTGTTTGTTCTTCTGTCAATAGAGAAACCAACGAGAAAGTTGCCATCAAGAAGATACAAAATGCGTTTGAGAATCGTGTTGATGCGATTAGAACTTTGCGTGAACTGAAACTTTTGCGACATCTTCACCATCAGAATGTTATTGCTTTGAAAGACGTCATGATGCCCATTCATAGGAATAGTTTTAAAGATGTTTATCTTGTTTATGAACTCATGGACACTGACTTGCATCAAATTATTAAGTCTTCTCAATCATTGTCTAATGATCACAACCAATATTTCCTCTTTCAGTTGCTTCGTGGCTTGAAATATCTTCACTCAGCTAACATTCTTCATCGTGACTTAAAACCTGGAAATCTTCTAGTTAATGCAAATTGTGACCTAAAAATATGTGATTTGGGGTTAGCACGCACCAAATGCAGCAAGAACCAGTTCATGACGGAGTATGTTGTCACACGGTGGTATAGGGCACCAGAACTCCTACTTTGTTGTGACAACTATGGAACATCTATTGATGTATGGTCAATGGGATGCATCCTTGCTGAACTTCTTGGACGAAAACCTATTTTTCCCGGTTCAGAGAGCCTCAACCAACTAAAACTTATTATCAATATCCTTGGTAGTCAGAGGGATGAGGATATTGAATTTATTGATAATCCAAGGGCAAAGGGGTACATCAAATCACTTTCATATTCTCCCGGAACCCCATTTTCCAAACTTTACCCGAATGCACAACCATTGGCAATTGATCTACTAGCAAAGATGCTTGTTTTTGATCCCACAAAGAGGATTAGTGTCGCAGAAGCTCTTCAACACCCATTCATGGCCTCTCTTTATGATCCTAATTGTGACCATTCTGCCATCATTCCAGTTGATCTTGACATTGATGATGATCTAGAGGAAGAACTGATAAGGGAGTTGATGTGGAAGGAAATGATTCATTACCATCCTGAATATGCTATTGCAAATTGA 1104 0.3958 MATPVEPPNGTRVEGKHYFSMWQTVFEIDTKYVPIKPIGRGTYGIVCSSVNRETNEKVAIKKIQNAFENRVDAIRTLRELKLLRHLHHQNVIALKDVMMPIHRNSFKDVYLVYELMDTDLHQIIKSSQSLSNDHNQYFLFQLLRGLKYLHSANILHRDLKPGNLLVNANCDLKICDLGLARTKCSKNQFMTEYVVTRWYRAPELLLCCDNYGTSIDVWSMGCILAELLGRKPIFPGSESLNQLKLIINILGSQRDEDIEFIDNPRAKGYIKSLSYSPGTPFSKLYPNAQPLAIDLLAKMLVFDPTKRISVAEALQHPFMASLYDPNCDHSAIIPVDLDIDDDLEEELIRELMWKEMIHYHPEYAIAN 367
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00312 367 Gene3D Transferase(Phosphotransferase) domain 1 116 345 - -
Tsu07g00312 367 Pfam Protein kinase domain 33 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00312 367 SUPERFAMILY Protein kinase-like (PK-like) 24 325 IPR011009 -
Tsu07g00312 367 ProSitePatterns MAP kinase signature. 67 170 IPR003527 GO:0004707|GO:0005524|GO:0006468
Tsu07g00312 367 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 12 363 - -
Tsu07g00312 367 ProSitePatterns Protein kinases ATP-binding region signature. 38 62 IPR017441 GO:0005524
Tsu07g00312 367 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 12 363 - -
Tsu07g00312 367 Gene3D Phosphorylase Kinase; domain 1 19 355 - -
Tsu07g00312 367 ProSitePatterns Serine/Threonine protein kinases active-site signature. 154 166 IPR008271 GO:0004672|GO:0006468
Tsu07g00312 367 SMART serkin_6 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00312 367 ProSiteProfiles Protein kinase domain profile. 32 319 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00312 Tsu-Chr7 2393837 2395355 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00312 1 367 MAP Kinase Gene Family AT1G10210 80.654 0.0 633
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Tsu07g00312 Pkinase 4e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00312 K20535 - gmx:100798863 657.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00312 07 2393837 2395355 Tsu07g00312 07 2393837 2395355 ECH