Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00307 ATGTATCCCAACCATTCATTCTCTTCGGGGTCCTATACCGATATGTTCACCGCGAATCCTCCTTTGTTACCTCACAACTACTACAATGAATCTGTAGTAGGACAAAATGAAGCTAAGTTTATCCCAGCTATGGGCGACACAGTGACTATGCAGTCCAACTCTAATGTTGATTTTGAGCAAAATATGCAGTGCCAAGAGTTATCTCTTAGTCTCGGTACACTATTGCCTTCTACTGCATCTGTCCCTCCATTTCAATATCAGTATCACGACACCGGTTTTGTTTCGCTTATGAATGCATGTCTTCCAAAGGGAACTACAATATCCAATGATGATGAGTTGAAAAATGTTGAATGTATGGCATCTATATCTTCTGGAGGCTTTCATGACATTACCAAAAGGGAAAGTTTTCGCAACGCTGACCCCTCAGATCAATGCCTACAGGGTTCACAGGTTTTTCCCAATATTTTACTGAACACTCAATATCTTAAAGCTACACAGGAGTTACTTGATGAGATAGTTAATGTCCGAATCCGAAAGCAACATGCAAtggaaaaacaagaaaaaaactgTGACATTGGATTAGATAACTCCAAAGACACTAATGCAAAATCTACTAGTCAGTCTGTGCAAATGTCTTCAGCCCCTAATGATTCTAATTCCAATCCTTCTTGTGAATTATCTCCGGCAGAAAGACAAAATTTGTTGGATAAGAAGACACAGCTTTTGTCCATGTTGGATGAGGTAGATAGAAGATACAGGCACTACTGCAATCAGATGCAGATTGTGGTGTCATCTTTGGACATGGTTGCTGGTTGTGGAGCAGCAGAACCATATACTACACTTGCGTTGCGTACAATTTCGCGCCATTTTCGCTGCTTGCGCGATGCAATTAGCAGCCAAATTCAAGTAATTCAAAGGAGCCTTGGGGAACAAGAAGGAATTCCTCGTCTCCGGTATGTTGATCAACAGCTTAGAAAACAAAAGGCACTTCACCATCTCGGTGTTATGCGACAGGCTTGGAGACCACAGAGAGGACTTCCTGAGAACTCTGTCTCAATACTACGCGCTTGGCTCTTCGAACATTTTCTTAATCCTTACCCTAAGGATTCGGAGAAAATCATGCTAGCTAGGCAGACTGGTTTAACAAGGAATCAGGTGGCGAATTGGTTCATTAATGCACGAGTGCGTCTTTGGAAACCAATGGTTGAGGAAATATACAAAGAAGAGTTTGGTGAATCTGAAATAAACTGCAATTATTCATCTGAAAATAAACTCCAAGGTAAAAGAAATTATACTGAACaagaaattgatgataaatCAGAAGAAGAGTCACAGGACAATGTACAAATAATTACTAGTGATAGTGTACAAACATATTCCACTAAAGAACATGTAGAAAAAAATGTGATATTGGATTATGATAAAGAAAGGTTGAGCGTGAAAAATGGCTTTTATTCAGAAATAGCTTATGATAGTGCCACATATGATTTATCAGAGTTATGTGGTGGCCACCACCAGCAACACAATGTGTCTCTTGCATTGGAGTTGAGGAACTGTGAAAGTGATGTATTAGCCATATCTGATGATACCATTCATAAAAGACATAATAATCAAATattggcttcttcttcttcatcacaGATCAGTACTGATTTACTAGAATATCATTTCACAGATTCAGGAAAGCAACAACACAGGTTTGGCAATACTCATCTGTTGCATGAATTTGTTGTATGA 1737 0.3805 MYPNHSFSSGSYTDMFTANPPLLPHNYYNESVVGQNEAKFIPAMGDTVTMQSNSNVDFEQNMQCQELSLSLGTLLPSTASVPPFQYQYHDTGFVSLMNACLPKGTTISNDDELKNVECMASISSGGFHDITKRESFRNADPSDQCLQGSQVFPNILLNTQYLKATQELLDEIVNVRIRKQHAMEKQEKNCDIGLDNSKDTNAKSTSQSVQMSSAPNDSNSNPSCELSPAERQNLLDKKTQLLSMLDEVDRRYRHYCNQMQIVVSSLDMVAGCGAAEPYTTLALRTISRHFRCLRDAISSQIQVIQRSLGEQEGIPRLRYVDQQLRKQKALHHLGVMRQAWRPQRGLPENSVSILRAWLFEHFLNPYPKDSEKIMLARQTGLTRNQVANWFINARVRLWKPMVEEIYKEEFGESEINCNYSSENKLQGKRNYTEQEIDDKSEEESQDNVQIITSDSVQTYSTKEHVEKNVILDYDKERLSVKNGFYSEIAYDSATYDLSELCGGHHQQHNVSLALELRNCESDVLAISDDTIHKRHNNQILASSSSSQISTDLLEYHFTDSGKQQHRFGNTHLLHEFVV 578
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00307 578 MobiDBLite consensus disorder prediction 195 227 - -
Tsu07g00307 578 MobiDBLite consensus disorder prediction 186 227 - -
Tsu07g00307 578 SUPERFAMILY Homeodomain-like 341 406 IPR009057 -
Tsu07g00307 578 SMART HOX_1 340 404 IPR001356 GO:0003677
Tsu07g00307 578 MobiDBLite consensus disorder prediction 424 447 - -
Tsu07g00307 578 Pfam Homeobox KN domain 357 396 IPR008422 GO:0003677|GO:0006355
Tsu07g00307 578 Gene3D - 337 414 - -
Tsu07g00307 578 Pfam Associated with HOX 156 298 IPR006563 -
Tsu07g00307 578 ProSiteProfiles 'Homeobox' domain profile. 337 400 IPR001356 GO:0003677
Tsu07g00307 578 CDD homeodomain 340 401 IPR001356 GO:0003677
Tsu07g00307 578 PANTHER BEL1-LIKE HOMEODOMAIN PROTEIN 10 28 534 - -
Tsu07g00307 578 SMART prehox3 150 299 IPR006563 -
Tsu07g00307 578 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 28 534 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00307 Tsu-Chr7 2366019 2369154 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00307 35 422 Homeobox Transcription Factor Family AT1G19700 48.175 1.80e-107 331
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Tsu07g00307 POX 6.7e-48 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00307 - - gmx:100791641 686.797
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00307 07 2366019 2369154 Tsu07g00307 07 2366019 2369154 ECH