Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00296 ATGGATCTAATACGATCAGAACCTATGCAACTTGTTCAATTAATCATTCCAATTGAATCAGCTCATCGATCCATCTCTTACCTTGGTGATCTCGGCCTTTTTCAATTCAAAGATcttaatgaaaataaaagcCCATTCCAACAAACTTACGCTTCCCAGGTTAAAAGATGTGGGGAAATGACACGTACGTTACGATTATTTAAGGAACACATGGTGAAGGCAAATATATCTCTCCCAACATGGTCAACAAGAGACGGTGGTCTTGATCTAGAAAATTTGGAGGTTGTTAAACTAGCAGAACTTGAAACTGAGCTACTCGAGATTAACGCAAATAACGAGAAGTTGCAACACACTTACAATGAGCTTGTAGAGTATAAGCTTGTTCTAGAGAAGgTTGGAGAGTTTTTCTCTTCAGCACAAAACAATGTTGTAGCTCGCCAAAGAGAGCTTAAAGTTCAACCAATTATTGAAACTTCTATTGACAGTCCATTATTAATGGAACAAGAAGCAACATGTCTAGGAAAACATATTAAATTGGGGTTTATAAGTGGTCTTGTCACTAGGGAAAAATCAATTCCTTTTGAAAGAACTTTATTTCGTGCAACTAGGGGAAATGTGTTTCTAAAGCAAGCTATTGTTGATCATAAAGTTCGAGATCCTTTGTCAGGAGATAAGGTTCACAAAAAtgtatttgttatattttattcagGAGAAAGagttaaaagtaaaattatcaaaatttgtGATGCTTTTGGAGCAAATCGTTATCCTTTTTCAGATGAATTGGATAAACAATTTCAGATGATAACAGAGGTGTCAGAAAGAATTGCAGAATTAAAGACAACAATTGATGTAGGTTTGCTGCACCGAAACACTTTGTTACATAAAATTGGATATCAATTTGAGTCATGGAACCTTCTGttaaagaaggaaaaatccATTTATCACATTCTAAATATGCTAAGCATTAATGTGACAAAGAAATGTCTCCTTGCAGAAGGTTGGTGCCCTATATTTGCAGCAAGACAGATTTGTCGttTATTGTTGCAAGCAACTATGGAATGTAACTCTCAAGTGGGAACAATATTTCAGGTTTTACAGACAAAGGAGTTACCACCCACCTATTTTTGCACTAACAATTTTACTTCTTCTTTTCAAGAAATTGTAGATGCTTATGGGATTGCCAAGTACCAGGAAGCAAATCCCGGTGTATACACAATCATCACGTTTCCATTCCTTTTCGCGGTAATGTTTGGCGATTGGGGTCACGGTATATGCTTACTACTGGCGACTTTGTATTTCATAAtcaatgagaaaaaaatttattctcAGAAACTTGGTGACATATTAGAAATGGTTTTTGGGGGAAGATACATTATTATGATGATGACACTCTTTTCGATTTACACCGGATTAATATACAACGAATTCTTCTCCATTCCATTTGAACTATTTGGACCAACTGCCTATGAATGTCGTGATCCTTCGTGCAGtgattctAATACAATAGGTTTGATAAAAGTGCGTGACACTTATCCATTTGGTGTCGATCCTAAATGGCATGGTACTCGGAGTGAACTTCCATTTCTTAACTCTTTGAAAATGAAGATGTCAATTTTACTTGGAGTATCCCAAATGAATCTTGGAATTATATTGAGTTACTATAATGCCAAATACTTTGAAAACAACATAAATATCTGGCACCAATTTGTTCCCCAGATGATATTTTTAAACAGTCTATTTGGCTACCTTTCACTCCTTATAGTTGTAAAATGGTGCACTGGATCACAGGCTGACTTGTATCATGTTATGATATACATGTTCCTAAGTCCAACAGATGATTTGGGtgaaaaccaactctttgttgGCCAAAAGTCATTTCAAGTTACGTTACTACTTTTGGCACTCATTGCTGTACCATGGATGTTGTTACCAAAACCATTTCTCTTGAAGAAACAGCATGAAAAAAGGCATAAATGTCAGTCTTACTCTTTGCTCAATAGTGGGGAGGATCCTCTTGAATCAGAATCACATAGTATTCACATTGACCACAAGGAGTTTGATTTCAGCGAGATTTTTGTGCACCAACTTATACACACAATAGAATTTGTGCTTGGAGCTGTGTCTAACACAGCTTCATATCTTCGTTTATGGGCTCTCAGTCTAGCTCATTCGGAGTTATCAAGTGTTTTTTATGACAAAGTTCTGCTTCTCGCTTGGGGGTATAACAACACCATTGTTCTCATTGTTggaattattgtttttatatgtGCAACTGTTGGTGTCTTACTAGTAATGGAAAGTCTAAGTGCTTTCTTACATGCTTTGAGACTTCACTGGaatagaagagaaaagaaagtcaGAAACAGAGAAAAGAAAGTACGAACCCTAGCACCTACCTTGTTCGCCGCCGTCCTCCCTTGTTCCTTCTCCATCGCTCTCGCCGACTCCGTCCATCCACTGTACTCCGTCCGACCCTTGGTCACTCAAGCTTCACTTCTTCCACCTTCTCCTTCGTCACCGCCACTCCTACTCGCTCACCGAGCTCCTACTCACGCCTTCTTCCTTGGTTCAGATTCAGAAGTGAGAACCCTCTCCCTTTCTTAA 2607 0.361 MDLIRSEPMQLVQLIIPIESAHRSISYLGDLGLFQFKDLNENKSPFQQTYASQVKRCGEMTRTLRLFKEHMVKANISLPTWSTRDGGLDLENLEVVKLAELETELLEINANNEKLQHTYNELVEYKLVLEKVGEFFSSAQNNVVARQRELKVQPIIETSIDSPLLMEQEATCLGKHIKLGFISGLVTREKSIPFERTLFRATRGNVFLKQAIVDHKVRDPLSGDKVHKNVFVIFYSGERVKSKIIKICDAFGANRYPFSDELDKQFQMITEVSERIAELKTTIDVGLLHRNTLLHKIGYQFESWNLLLKKEKSIYHILNMLSINVTKKCLLAEGWCPIFAARQICRLLLQATMECNSQVGTIFQVLQTKELPPTYFCTNNFTSSFQEIVDAYGIAKYQEANPGVYTIITFPFLFAVMFGDWGHGICLLLATLYFIINEKKIYSQKLGDILEMVFGGRYIIMMMTLFSIYTGLIYNEFFSIPFELFGPTAYECRDPSCSDSNTIGLIKVRDTYPFGVDPKWHGTRSELPFLNSLKMKMSILLGVSQMNLGIILSYYNAKYFENNINIWHQFVPQMIFLNSLFGYLSLLIVVKWCTGSQADLYHVMIYMFLSPTDDLGENQLFVGQKSFQVTLLLLALIAVPWMLLPKPFLLKKQHEKRHKCQSYSLLNSGEDPLESESHSIHIDHKEFDFSEIFVHQLIHTIEFVLGAVSNTASYLRLWALSLAHSELSSVFYDKVLLLAWGYNNTIVLIVGIIVFICATVGVLLVMESLSAFLHALRLHWNRREKKVRNREKKVRTLAPTLFAAVLPCSFSIALADSVHPLYSVRPLVTQASLLPPSPSSPPLLLAHRAPTHAFFLGSDSEVRTLSLS 868
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00296 868 Pfam V-type ATPase 116kDa subunit family 27 780 IPR002490 GO:0033179|GO:0046961|GO:1902600
Tsu07g00296 868 PANTHER V-TYPE PROTON ATPASE SUBUNIT A 1 789 - -
Tsu07g00296 868 Coils Coil 98 118 - -
Tsu07g00296 868 PIRSF ATP6V0A1 1 786 IPR026028 GO:0000220|GO:0046961
Tsu07g00296 868 PANTHER VACUOLAR PROTON ATPASES 1 789 IPR002490 GO:0033179|GO:0046961|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00296 Tsu-Chr7 2274387 2285083 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00296 1 786 Primary Pumps ATPases(2) AT4G39080 69.899 0.0 1166
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00296 K02154 - gmx:100805813 1297.72
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00296 07 2274387 2285083 Tsu07g00296 07 2274387 2285083 ECH