Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00291 ATGTGTAACAAACACCAAGCTTCTTTATTCTGCACCGCCGACGAAGCTGCCTTATGCTCCGCCTGCGACCACCGTGTCCATCTTGCTAACAAGCTCGCCTCTAAACACCATCGCTTCTCTCTCAACGTTCCTAATTCTCCAAACAATTTACCTCTCTGCGATATTTGCCATGAAAGAAAAGGATTTGTTTTCTGTCAAGAAGATAGAGCGATTGTGTGCAAAGACTGTGATTTGAATATTCATGCTGCCAATGAACACACAAAGAAACATAACAAGTTTCTTCTAAGTGGGATTAAACTGCTCTCTCCTGCTCCTCCTGCCATCAACGAGGGTAGTTTGGTAATTACAAATAATGAAGAAGCTGGAAGTTTCACCATATCTGAGTATTTGATAAATGCAATCCCTGGTTGGAAGTTTGAAGATTTCATTGATTCACCTTCTTTTGATAAATTACAGAATCATCATATTATTGGTGAAGATACTAGTACTACCTTGGTTCCTCAAGCACCACagtcttctttttattattctGAAAAAATGGATAACAGATCATCAGAAATAATTAAGGATAGCAGCAGCTTGGGGGATGATCATTTCATGACAGTTCCACAGATAATAATAAGTCCTCccacttcttcaaaaaaattaataagtcctcccaaataa 666 0.3634 MCNKHQASLFCTADEAALCSACDHRVHLANKLASKHHRFSLNVPNSPNNLPLCDICHERKGFVFCQEDRAIVCKDCDLNIHAANEHTKKHNKFLLSGIKLLSPAPPAINEGSLVITNNEEAGSFTISEYLINAIPGWKFEDFIDSPSFDKLQNHHIIGEDTSTTLVPQAPQSSFYYSEKMDNRSSEIIKDSSSLGDDHFMTVPQIIISPPTSSKKLISPPK 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00291 221 ProSiteProfiles Zinc finger B-box type profile. 48 95 IPR000315 GO:0008270
Tsu07g00291 221 PANTHER B-BOX ZINC FINGER PROTEIN 21 1 102 - -
Tsu07g00291 221 PANTHER B-BOX ZINC FINGER PROTEIN 21 118 177 - -
Tsu07g00291 221 ProSiteProfiles Zinc finger B-box type profile. 1 41 IPR000315 GO:0008270
Tsu07g00291 221 PANTHER B-BOX ZINC FINGER PROTEIN 22 1 102 - -
Tsu07g00291 221 PANTHER B-BOX ZINC FINGER PROTEIN 22 118 177 - -
Tsu07g00291 221 Gene3D Classic Zinc Finger 1 94 - -
Tsu07g00291 221 SMART bboxneu5 48 95 IPR000315 GO:0008270
Tsu07g00291 221 SMART bboxneu5 1 41 IPR000315 GO:0008270
Tsu07g00291 221 CDD Bbox1_BBX-like 2 41 - -
Tsu07g00291 221 CDD Bbox1_BBX-like 52 95 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00291 Tsu-Chr7 2222922 2223791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00291 53 95 C2C2-CO-like Transcription Factor Family AT1G75540 41.860 5.13e-06 44.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00291 - - gmx:100785978 196.052
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00291 07 2222922 2223791 Tsu07g00291 07 2222922 2223791 ECH