Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00274 ATGGCTTTAAGAAAATCAACTAAACTTCCACAAACAGCACTGATCAAACAAATCCTTAAAAGATGTTCAAGTTTAGGTAAAAAAGATGATCTTCGTTTAGATGTTCCAAAAGGTCACTTTGTTGTATATGTTGGTGAAAACAGAAGCAGGTACATTGTTCCAATTTCATTTCTAAGTAGACCAGAGTTTCAAAACCTTTTACATCAAGCTGAAGAAGAATTTGGATTTGATCATGATATGGGTCTCACTATTCCTTGCCAACAAGATGTTTTTGAGTCTCTTACTTCCATGCTTCTCAGATAG 303 0.3432 MALRKSTKLPQTALIKQILKRCSSLGKKDDLRLDVPKGHFVVYVGENRSRYIVPISFLSRPEFQNLLHQAEEEFGFDHDMGLTIPCQQDVFESLTSMLLR 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00274 100 Pfam Auxin responsive protein 27 98 IPR003676 GO:0009733
Tsu07g00274 100 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 98 IPR003676 GO:0009733
Tsu07g00274 100 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00274 Tsu-Chr7 2097593 2098397 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00274 3 100 Calmodulin-binding Proteins AT4G34750 39.216 1.30e-19 76.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00274 K14488 - gmx:100305700 178.333
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00274 07 2097593 2098397 Tsu05g00826 05 7046510 7047186 ECH
Tsu07g00274 07 2097593 2098397 Tsu04g03498 04 44173541 44174374 ECH
Tsu07g00274 07 2097593 2098397 Tsu07g00274 07 2097593 2098397 ECH