Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00260 ATGAAGTATATATCTCTCTTGTTTGTTCTCTTCACTGCTCTTCTTGTCTCAACTTCCCAAGCCTTTAAATTGGACGTTGGTGGAACTGATGGTTGGACTCTAAACCCTTCTGAGAATTACAACCATTGGGCTGGAAGGTACAGGTTCCAAATCAATGACGTTATAGTTTTCAAATACAAGAAGGGTTCAGACTCAGTGTTGGAAGTAAACAAAGAAGATTATGAAAAGTGCAACAAAACAAACCCAATCAAGAAATTCGAAGATGGTGAGACAGAGTTCACTTTAGATAAATCAGGACCATTCTATTTCATCAGTGGAAAAGATGAAAATTGTGAAAAGGGTCAGAAATTAACACTTGTTGTTATATCCCCACGTAAACACACACCACCCGTTGTTCCTACTCCAACATCACCACCAAAATCTTCCCCATCACCCTCTGTTTCACCTTCTCCCCCTGCAAATTCCCCTCTACCAGCTGGTGGACCTACAACTTCATCTCCTCCGGTCAGCACCCCTCCGGCTAGCGGACCTACTGCTTCATCTCCATCTCCAGTGAGTACACCTCCAGCCAGTGGACCTACTGCTTCATCTCCATCTCCAGTGAGCACACCTCCAGCCGGTGGACCTACGAGTTCATCTCCAGTGAGCACACCTCCGGCGGGTGGACCTACAACTTCCTCTCCTACGAGTACCCCTACAGCTGGTGGACCACCGACGCCATCACCGGGGTCTCCGGGGAGCTCTACACCGGCAGATGGTCCTGGCGCATCGGGAACACCTACACTAGGACCGTCAGGAACTGAAAATGCAAAGACACCGTCGGGAAGCAGTGGCTCCTATGTAGGTCCACCGAGCTTTGTGGTGTATTCCATTATTGTTGTCGTTAGTGCTCTGTTTTTGAGCTACTGA 909 0.4807 MKYISLLFVLFTALLVSTSQAFKLDVGGTDGWTLNPSENYNHWAGRYRFQINDVIVFKYKKGSDSVLEVNKEDYEKCNKTNPIKKFEDGETEFTLDKSGPFYFISGKDENCEKGQKLTLVVISPRKHTPPVVPTPTSPPKSSPSPSVSPSPPANSPLPAGGPTTSSPPVSTPPASGPTASSPSPVSTPPASGPTASSPSPVSTPPAGGPTSSSPVSTPPAGGPTTSSPTSTPTAGGPPTPSPGSPGSSTPADGPGASGTPTLGPSGTENAKTPSGSSGSYVGPPSFVVYSIIVVVSALFLSY 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00260 302 PANTHER BLUE COPPER PROTEIN 4 301 IPR039391 GO:0009055
Tsu07g00260 302 Pfam Plastocyanin-like domain 32 115 IPR003245 GO:0009055
Tsu07g00260 302 ProSiteProfiles Phytocyanin domain profile. 22 123 IPR003245 GO:0009055
Tsu07g00260 302 MobiDBLite consensus disorder prediction 121 281 - -
Tsu07g00260 302 MobiDBLite consensus disorder prediction 208 232 - -
Tsu07g00260 302 Gene3D - 21 125 IPR008972 -
Tsu07g00260 302 MobiDBLite consensus disorder prediction 128 207 - -
Tsu07g00260 302 PANTHER PLASTOCYANIN-LIKE DOMAIN PROTEIN 4 301 - -
Tsu07g00260 302 CDD OsENODL1_like 22 122 IPR041846 -
Tsu07g00260 302 SUPERFAMILY Cupredoxins 21 122 IPR008972 -
Tsu07g00260 302 MobiDBLite consensus disorder prediction 248 281 - -
Tsu07g00260 302 PRINTS Proline rich extensin signature 124 145 - -
Tsu07g00260 302 PRINTS Proline rich extensin signature 145 161 - -
Tsu07g00260 302 PRINTS Proline rich extensin signature 164 181 - -
Tsu07g00260 302 PRINTS Proline rich extensin signature 184 209 - -
Tsu07g00260 302 MobiDBLite consensus disorder prediction 233 247 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00260 Tsu-Chr7 1999828 2002738 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00260 1 224 Phytocyanin Superfamily AT5G53870 44.248 8.29e-54 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00260 - - cam:101497669 199.519