Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00251 ATGGCTGTTCAAACAAAATATCGTCTCATTACTTACTCACCAGAGATTGTAGATGGGAAGCCTATTTTTGTTTCATCGAATTGTCTACCGGCTAAGGCGTTGAAATATGAGCCGGCAGGTCATTCTTTTCATTCTGCTGCACTTAAACTTATGGGTGTTAAGGAAGAAAAAGATAACAAAGATGATATTAAGAAAGTGGTTGGCAATAAGGAACAAGCTTATTTGCCATCAGAGTCTTATAGCAGCAAGAGCAAAAAGAAAACTAAGGATGGAGAGGAGCAACAACAGGATCACTATGCATTGTTGGGTTTGAGTCATCTTAGGTATCTTGCGACCGATGAGCAAATTCGTAGAAGCTATCGTGAAGTTGCCTTGAAGTTTCATCCAGACAAACAAGCTGCCCTTCTTCTTGCTGAGGAAACTGAGGCTGCGAAGGAGGCTAAGAAAGTTGAAATAGAAACTCATTTCAAGGCAATCCATGAGGCGTATGAAGTGTTGGTTGATCCCGTGAAAAGAAGAATTTACGATTCTACTGATGAGTTTGATGACGAGATTCCTACTGACTGTGCTCCACAAGACTTCTTCAAGGTGTTTGGTCCAGCTTTTATGAGGAATGGACGGTGGTCGGTGAATCAACCAATTCCATCATTAGGTGATGATAAGACTTCAATAAAGGAAGTTGACAGTTTCTACGATTTTTGGTATTCCTTTAAAAGCTGGAGGGAGTTTCCCCAGGATGATGAGTGTGATCTTGATCAAGCTGAAAATCGAGACCATAAAAGGTGGATGGAAAGGCAGAATGCAAAACTTTCGGAAAAAGCTAGGAAGGAAGAGTATGCACGGATCCGCACTCTTGTTGATAATGCTTATAAGAGGGACCCTAGAATATTGAGAAGAAAGGAAGAGATAAAGGCtgagaagaaaaggaaaaaggagTCCAAGTTCTTGGCAAAGAAGTTGGAGGAGGAAGAAGCTGCCAGAATTGCTGAAGAGGAGAAAAAACGAAAAGCAGAGGAAGATAAAAAAGCTGCTGAAACTGCTTTGCAACAGAAAAAGGTGAGGGAGAAAGAGAAAAAGCTCTTGCGGAAGGAGCGGACACGCCTTCGAACTCTCTCAGGACCTATCTCGTCACAACACATACTTGATATTTCTGAAGACGATGTAGAAGAGATTTGCATGTCATTTAATATTGAGCAGTTGAGGGGTTTGTGCGAGAAAATGGAAGGTAAAGAGCTGTTAGAGCAAGCAGAAGCTCTAAGAGATGCAGTGAGTAGCAAGAAACATGTTGTTGAGGGTAAAAGTAATCAACAAAATGGCTCTGTTAAGGCTAATGGAAGCAGTAGTTCTCTATCCGGCTATGCAGAGAAGAAGGAAAAACCTTGGACTAAAGAAGAGATCGAGCTATTGAGAAAAGGAGTGCAAAAGTTTCCCAAAGGAACTTCAAGGAGATGGGAAGTTGTTTCAGAATACATTGGCACTGGAAGATCTGTTGAAGAAATATTGAAAGCAACTAAAACCGTTCTCCTCCAGAAGCCCGATACAGCCAAAGCTTTCGACACATTTCTTGAGAAGAGGAAACCTGCTGCACAATCAATTGCATCTCCACTGACGACCAGAGAAGAACTGGAAGGGGTATCAATACCAGCTACAGCACCTGAAAATAGTGCTGCCATCTCAACGACAAAAACAGCACCAACACTGGCGACAACGACAAAAACAGCACCAACACCGGCGACAACGACAAAAATAGCACCAACACCGACAAcagcaacagcaacaacaacaacaacaacaacaacaacaaaaaacaccaGCCCGGAAGCATCTCAAGGAGTTTCAGAACAGGAAGTGTGGTCTGACGTGCAGGAAACAGCACTAATTCAAGCTTTGAAAACCTTTCCAAAGGAAGCTAACCAGAGATGGGAACGAGTATCTGCAGCTGTACCTGGGAAGACTGTGAACCAGTGCAAGAAGAAATTTGCCATGCTGAAGGAAAATTTCAGGAACAAGAAAACAGCAGTTTGA 2025 0.4109 MAVQTKYRLITYSPEIVDGKPIFVSSNCLPAKALKYEPAGHSFHSAALKLMGVKEEKDNKDDIKKVVGNKEQAYLPSESYSSKSKKKTKDGEEQQQDHYALLGLSHLRYLATDEQIRRSYREVALKFHPDKQAALLLAEETEAAKEAKKVEIETHFKAIHEAYEVLVDPVKRRIYDSTDEFDDEIPTDCAPQDFFKVFGPAFMRNGRWSVNQPIPSLGDDKTSIKEVDSFYDFWYSFKSWREFPQDDECDLDQAENRDHKRWMERQNAKLSEKARKEEYARIRTLVDNAYKRDPRILRRKEEIKAEKKRKKESKFLAKKLEEEEAARIAEEEKKRKAEEDKKAAETALQQKKVREKEKKLLRKERTRLRTLSGPISSQHILDISEDDVEEICMSFNIEQLRGLCEKMEGKELLEQAEALRDAVSSKKHVVEGKSNQQNGSVKANGSSSSLSGYAEKKEKPWTKEEIELLRKGVQKFPKGTSRRWEVVSEYIGTGRSVEEILKATKTVLLQKPDTAKAFDTFLEKRKPAAQSIASPLTTREELEGVSIPATAPENSAAISTTKTAPTLATTTKTAPTPATTTKIAPTPTTATATTTTTTTTTKNTSPEASQGVSEQEVWSDVQETALIQALKTFPKEANQRWERVSAAVPGKTVNQCKKKFAMLKENFRNKKTAV 674
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00251 674 MobiDBLite consensus disorder prediction 427 456 - -
Tsu07g00251 674 ProSiteProfiles dnaJ domain profile. 97 179 IPR001623 -
Tsu07g00251 674 SMART sant 614 666 IPR001005 -
Tsu07g00251 674 SMART sant 457 510 IPR001005 -
Tsu07g00251 674 Gene3D DnaJ domain 80 189 IPR036869 -
Tsu07g00251 674 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 573 671 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Tsu07g00251 674 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 1 555 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Tsu07g00251 674 SUPERFAMILY Homeodomain-like 615 666 IPR009057 -
Tsu07g00251 674 CDD DnaJ 97 168 IPR001623 -
Tsu07g00251 674 Gene3D - 610 674 - -
Tsu07g00251 674 Gene3D - 453 511 - -
Tsu07g00251 674 PRINTS DnaJ domain signature 102 120 IPR001623 -
Tsu07g00251 674 PRINTS DnaJ domain signature 120 135 IPR001623 -
Tsu07g00251 674 PRINTS DnaJ domain signature 151 171 IPR001623 -
Tsu07g00251 674 MobiDBLite consensus disorder prediction 568 616 - -
Tsu07g00251 674 ProSiteProfiles Myb-like domain profile. 453 508 IPR001005 -
Tsu07g00251 674 ProSiteProfiles Myb-like domain profile. 618 664 IPR001005 -
Tsu07g00251 674 SMART dnaj_3 96 171 IPR001623 -
Tsu07g00251 674 CDD SANT 460 500 IPR001005 -
Tsu07g00251 674 ProSitePatterns Nt-dnaJ domain signature. 156 175 IPR018253 -
Tsu07g00251 674 MobiDBLite consensus disorder prediction 429 453 - -
Tsu07g00251 674 Coils Coil 303 354 - -
Tsu07g00251 674 Pfam Myb-like DNA-binding domain 617 663 IPR001005 -
Tsu07g00251 674 Pfam Myb-like DNA-binding domain 459 500 IPR001005 -
Tsu07g00251 674 CDD SANT 618 664 IPR001005 -
Tsu07g00251 674 SUPERFAMILY Homeodomain-like 459 502 IPR009057 -
Tsu07g00251 674 ProSiteProfiles SANT domain profile. 613 668 IPR017884 -
Tsu07g00251 674 SUPERFAMILY Chaperone J-domain 90 175 IPR036869 -
Tsu07g00251 674 Pfam DnaJ domain 97 176 IPR001623 -
Tsu07g00251 674 PANTHER DNAJ DOMAIN, MYB-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 1 555 - -
Tsu07g00251 674 PANTHER DNAJ DOMAIN, MYB-LIKE DNA-BINDING DOMAIN PROTEIN-RELATED 573 671 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00251 Tsu-Chr7 1940729 1943695 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00251 98 297 C2H2 Transcription Factor Family AT1G74250 27.615 2.02e-15 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Tsu07g00251 DnaJ 6.7e-17 CL0392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00251 K09522 - gmx:100814414 816.609