Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00236 ATGGGATTCGTTTTGCGGCTACATCTTATTATATTTCAGATGAGATTCGATTTTCAAATTGTGTTATCCGCGCCTATTGATTTGTTACACGGACTGTATCTACAACTATTGGTAGGGATTAaatttttccaatttttgttCTAtaaataccaattgaagCGGTGCGCTCAATTTGTTTTCCCTTTTGAACTTTTGTATGAAAAAGCTAAGGACATTATGGTCTTTTCTATCGACAACTATGTTGCTTATCCCTCATTTCTTGCTGGAAATTCTTCCAATAATTATGTTCAAGTACCATCTACTGTACCTGTTATTTATgATTTACCAATGACTAGGAAAGCTACACTTCATCGGTTCTTGGAGGAAAGGAAGAATAGAGCTGATCACCTTCTCAAGGACTGGCGCGCTGCAAAGAATACGCAAAAAAACAGCAATGCAGTAGAGGTCGAAACTGCTGCTGTCATGACAGAATCGTGTGTGCAGCCGCATAGTGTAGACTTAGGAGAAGCATTGAGACTTTGCCATGCTTTTAATTGGGTTCAAGAGTTACAACTAGAACGAGTGGATGTTGTGCTTGACTCGAAAAATAGTTACAAGCGAATGAGATCGCTCATGCACTTGCAAGGGTAG 630 0.3778 MGFVLRLHLIIFQMRFDFQIVLSAPIDLLHGLYLQLLVGIKFFQFLFYKYQLKRCAQFVFPFELLYEKAKDIMVFSIDNYVAYPSFLAGNSSNNYVQVPSTVPVIYDLPMTRKATLHRFLEERKNRADHLLKDWRAAKNTQKNSNAVEVETAAVMTESCVQPHSVDLGEALRLCHAFNWVQELQLERVDVVLDSKNSYKRMRSLMHLQG 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00236 209 Pfam Jas motif 109 127 IPR018467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00236 Tsu-Chr7 1776406 1784082 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Tsu07g00236 Jas_motif 5.2e-06 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00236 K13464 - gmx:100306332 47.7506