Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00222 ATGGGAGATACAGAGAGTTGTTGCAATAGCAAAGTAGTTTTGGGTTCTGAATGGAATCAAAATGGCAAGGAGAAGCAGAAGATTGAAGTTTACATCAAAGTTCTTAATCGGCTTAGGGAATTGAATGTCCCCGAGGCTATGGTTTCTGGTTTTGAGGATGATCTTTGGGCGCACTTCCATCGCCTTCCCACTAGGTATGCTTTAGATATGAATGTGGAGAGGGCTCAATATGTTCTCATGCATAAAAGGTTACTGCATATCGCACGAACCTCAGCTACAGAAACTGGACCTGCACTTGAAGTCCGTCTTGTACAGGTTCGTTCTGCTTCTGGAGTGAGTACTTGTAGtaattctctacattcaaactCACAAAGTGAAGTTAGTCCTCAAGATTCTGATATTCATGGCAAAATGATGAGGCATATGCATGAAATTACAATTTCAACAAATGACAAGCCAAAACTTCTTAGTCAGTTGACTTCCTTACTGTCTGAGACTGGGCTGGACATTCAAGAAGCACATGCTTTTTCGACATCGGATGGCTATTCGTTGGATGTTTTCGTTGTTGGTGGTTGGGCAGTTGAGGAGACAGAAAAGTTAAAGCATGTACTAGCTAAGAAAATTCAGAAACTTGAGCGGTCTCAGTTGAAAGAAAACGGCAGTCTTCCTCTTGCAGAGCGAGAGAAAATTAGGATGAACATTATATCTAGACATGCAATTATTCCGACTCGTGAATATGGTGTCTCGACATGTGAAGCAAGTTGGTTtagatttgaaaagaaaattgcATCTGGATCCTCCAGTTACTTGTATAAAGGTACATTATGTAATCAAGATGTAGCTATCAAAGTCCTTAAGCAAGAAAGTTTGAATGAAAATATACAAAGGGAGTTTTCTCAGGAAGTCTATATCCTAAGTAAAATTCATCACCGAAATGTTGTCAAATTTATCGGCGCCTGTACAAAACCCCCATACCTTTACCTTGTCACAGAATATTTGTCTGGTGGAAGTATTTACGACCTATTGCATAAAGGGAACACCGTCCTTACTCTTCCATCTTTGCTCAAAGTAGCCATCGATGTTTCCGAAGGAATGAAATATTTACATCAGAATGATATCATACATCGAGACCTCAAGTCAGCTAATCTTTTGATAGATAAGACCAGGGTTGTTAAGGTTGCTGATTTTGGTGTAGCCAGAGTGCGTAATCAGTCTGGTATAATGACTGCAGAGACTGGAACTTATCGGTGGATGGCTCCGGAGGTTATTGAGCATAAACCATACGATCAAAAAGCCGATGTCTTTAGCTTTGCAATTGTTCTCTGGGAGCTGCTTACAGGAAAGCTTCCATATGAGCATTTGTCCCCATTGCAAGCAGCAGTTGGAGTGGTCCACAAGGGTTTAAGGCCCAAAATTCCAAGGCATACTCATCCAAAGTTGGTGGAATTGCTTCAGTGGTGTTGGCACCAAGATCCATCTTTGAGACCTAATTTTTCAGAAATTCAAGAATCTCTGCTGCACATTTCTAAGATGGTGAAGGCTAACATGCACAAATATCTTAAGTGTTGTAAGGGAGTTTTATTTGGGTGTTGTTGCAACCGATTGTTGGCATATGCCCTGCCTCTGCATATTGTGATTGGCGATGTGAGTGGTGGTGGTGCATGGTGTGACGCGCCAATGTTTTTTGGCGTTTGA 1695 0.4059 MGDTESCCNSKVVLGSEWNQNGKEKQKIEVYIKVLNRLRELNVPEAMVSGFEDDLWAHFHRLPTRYALDMNVERAQYVLMHKRLLHIARTSATETGPALEVRLVQVRSASGVSTCSNSLHSNSQSEVSPQDSDIHGKMMRHMHEITISTNDKPKLLSQLTSLLSETGLDIQEAHAFSTSDGYSLDVFVVGGWAVEETEKLKHVLAKKIQKLERSQLKENGSLPLAEREKIRMNIISRHAIIPTREYGVSTCEASWFRFEKKIASGSSSYLYKGTLCNQDVAIKVLKQESLNENIQREFSQEVYILSKIHHRNVVKFIGACTKPPYLYLVTEYLSGGSIYDLLHKGNTVLTLPSLLKVAIDVSEGMKYLHQNDIIHRDLKSANLLIDKTRVVKVADFGVARVRNQSGIMTAETGTYRWMAPEVIEHKPYDQKADVFSFAIVLWELLTGKLPYEHLSPLQAAVGVVHKGLRPKIPRHTHPKLVELLQWCWHQDPSLRPNFSEIQESLLHISKMVKANMHKYLKCCKGVLFGCCCNRLLAYALPLHIVIGDVSGGGAWCDAPMFFGV 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00222 564 Coils Coil 194 214 - -
Tsu07g00222 564 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 138 509 - -
Tsu07g00222 564 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 138 509 - -
Tsu07g00222 564 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 11 140 - -
Tsu07g00222 564 Gene3D Transferase(Phosphotransferase) domain 1 335 524 - -
Tsu07g00222 564 ProSiteProfiles Protein kinase domain profile. 256 520 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00222 564 Pfam Protein tyrosine and serine/threonine kinase 257 505 IPR001245 GO:0004672|GO:0006468
Tsu07g00222 564 SMART serkin_6 256 510 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00222 564 Gene3D Phosphorylase Kinase; domain 1 251 334 - -
Tsu07g00222 564 SUPERFAMILY Protein kinase-like (PK-like) 240 504 IPR011009 -
Tsu07g00222 564 PRINTS Tyrosine kinase catalytic domain signature 413 423 IPR001245 GO:0004672|GO:0006468
Tsu07g00222 564 PRINTS Tyrosine kinase catalytic domain signature 432 454 IPR001245 GO:0004672|GO:0006468
Tsu07g00222 564 PRINTS Tyrosine kinase catalytic domain signature 476 498 IPR001245 GO:0004672|GO:0006468
Tsu07g00222 564 PRINTS Tyrosine kinase catalytic domain signature 367 385 IPR001245 GO:0004672|GO:0006468
Tsu07g00222 564 PRINTS Tyrosine kinase catalytic domain signature 330 343 IPR001245 GO:0004672|GO:0006468
Tsu07g00222 564 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 11 140 - -
Tsu07g00222 564 ProSitePatterns Serine/Threonine protein kinases active-site signature. 373 385 IPR008271 GO:0004672|GO:0006468
Tsu07g00222 564 ProSiteProfiles ACT domain profile. 144 223 IPR002912 -
Tsu07g00222 564 SUPERFAMILY ACT-like 138 212 IPR045865 -
Tsu07g00222 564 CDD STKc_MAP3K-like 262 505 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00222 Tsu-Chr7 1650435 1655199 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00222 3 512 MAP Kinase Kinase Kinase AT4G35780 53.945 0.0 565
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Tsu07g00222 PK_Tyr_Ser-Thr 6.6e-69 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00222 - - gmx:100818047 721.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00222 07 1650435 1655199 Tsu07g00222 07 1650435 1655199 ECH