Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00211 ATGAGTGCCCTAAACGAACCACTTCAATACCCCGCTGCTCGTAGAGACGACTCAATCGTCGACGACTATCATGGCGTCAAAATCGCCGACCCCTATCGTTGGCTTGAAGATCCTGATGCTGAAGAAGTGAAAGAGTTTGTTGAGAAACAAGTTCAACTCACCAATTCAGTTATTCAAAAATGCGAAACAAGATCGAAGCTGAATGAAACTATCACTAAGCTATTTGATCATCCTCGTTATGATGCTCCTTTTAGGCGAggcaataaatatttttacttcCATAACACTGGCCTTCAGCCACAAGATATTCTCTATGTTCAGgATAGTTTGGATGGAAAACCTGAGGTTTTGCTTGACCCTAATGGCTTAAGTGAAGATGGAACTGTATCGTTGAACACATTTTCGGTGAGTGAAGATGCCAAGTACTTGGCTTATGCACTTAGTACTAGTGGTAGCGATTGGACGACTATAAAAGTGAAGCGTATCGAGGATAAGAATGCTGAGCCTGATCATTTATCATGGGTTAAATTTTCTTCCATTAGTTGGACACATGATAACAAAGGTTTCTTTTATAGCCGCTATCCAGCACCCAAGGATGGAGAAGTGGTAGATGCTGGGACTGAGACAAACTCCAACCTTTATCATATGCTCTATTATCATTTTCTGGGTACGGACCAATCACATGATATTTTGTGTTGGAAAGATCTTGAAAACCCTAAATATTCATTTGGAGGAATCGTTACCGATGATGGGAAGTATCTCCTCCTCTATATTTCAGAAGGGTGTGATCCAGTTAACAAACTTTACTACTGTGACATATCAAATCTTCCCAGCATACTAGAAACTTTTCGTAGTGAAAATTCCCCCCATCCTTTCGTCAAGCTTATTGATAATTTTGATGCAAAGTATGATTACATTGCAAATGATGAAACTGTGTTtacatttttaactaataaagaTGCTCCAAAATATAAACTAGTCCGAGTAAATTTGAAGGAACCAAATACATGGGCTGATATTCTCCAAGAGTCTGAAAAAGATGTACTTGAGTCAGCATGTGCTGTAAATGGTAACCAACTGATAGTAAGTTACTTGAGTGATGTGAAGCATCTTCTACAAGTAAGAGACTTAAAAACAGGTTCCTTGTTGCATCAACTGCCAATTGACATTGGCACAGTTTATGACATTTCTGCACGGCGTGAAGATAAAGTGGTCTTCATTAGCTTTACAAGCTTTCTATCTCCCGGTATTGTCTATCAGTGTAACCTGGAAACAGGAATTCCTGATCTGAAGATATTTCGTGAAATTGCGGTCCCTGGGTTTGATCGCTCTGAATTTCATGTCAATCAGGTTTTTGTCCCTAGTAAAGATGGTACCAAGATCCCAATTTTCATTGTTGCGAAAAAGGATATTATTTTGGATGGTTCACACCCGTGTCTGTTATATGGATATGGTGGTTTTAACATCAGTATTACACCGTCCTTCAGTGTTAGTCGCATTGTACTCACAAAACATTTAGGTTTTGTTTACTGCATTGCGAATATACGTGGTGGTGGAGAATATGGGGAGGAATGGCACAAAGCAGGTTCCCTTGCTAAAAAACAGAATTGCTTTGACGATTTCATTTCTGCAGCCGAATACCTTATATCTACTGGTTATACCCAACCCAAAAAGTTATGCATCGAAGGTGGAAGCAATGGTGGACTTCTTGTTGGTGCTTGCATAAATCAGAGACCTGATCTCTTTGGTTGTGCATTGGCTCATGTTGGCGTTATGGACATGCTACGATTCCACAAATTTACCATAGGTCATGCTTGGACCTCAGATTATGGTTGTGCAGACAAGGAGGAAGAGTTTCATTGGCTAATCAAGTACTCACCATTGCATAATGTCCGGCGACCGTGGGAACAGCATCCTGACAAGTCAATTCAGTACCCAGCAACCATGTTGTTGACAGCAGATCATGATGATCGAGTTGTGCCACTACACTCATTGAAGCTATTGGCGACCATGCAATATGTGCTATGTAGTAGCTTGGAGAAAAGTCCCCAGACCAACCCCATAATTGGTCGCATTGACTGCAAAGCTGGACATGGAGCGGGTCGTCCAACACAGAAAATGATTGATGAAGCTGCTGATCGGTACAGTTTTATGGCAAAAATGTTAGGAGCGCATTGGATTGAATAG 2187 0.4033 MSALNEPLQYPAARRDDSIVDDYHGVKIADPYRWLEDPDAEEVKEFVEKQVQLTNSVIQKCETRSKLNETITKLFDHPRYDAPFRRGNKYFYFHNTGLQPQDILYVQDSLDGKPEVLLDPNGLSEDGTVSLNTFSVSEDAKYLAYALSTSGSDWTTIKVKRIEDKNAEPDHLSWVKFSSISWTHDNKGFFYSRYPAPKDGEVVDAGTETNSNLYHMLYYHFLGTDQSHDILCWKDLENPKYSFGGIVTDDGKYLLLYISEGCDPVNKLYYCDISNLPSILETFRSENSPHPFVKLIDNFDAKYDYIANDETVFTFLTNKDAPKYKLVRVNLKEPNTWADILQESEKDVLESACAVNGNQLIVSYLSDVKHLLQVRDLKTGSLLHQLPIDIGTVYDISARREDKVVFISFTSFLSPGIVYQCNLETGIPDLKIFREIAVPGFDRSEFHVNQVFVPSKDGTKIPIFIVAKKDIILDGSHPCLLYGYGGFNISITPSFSVSRIVLTKHLGFVYCIANIRGGGEYGEEWHKAGSLAKKQNCFDDFISAAEYLISTGYTQPKKLCIEGGSNGGLLVGACINQRPDLFGCALAHVGVMDMLRFHKFTIGHAWTSDYGCADKEEEFHWLIKYSPLHNVRRPWEQHPDKSIQYPATMLLTADHDDRVVPLHSLKLLATMQYVLCSSLEKSPQTNPIIGRIDCKAGHGAGRPTQKMIDEAADRYSFMAKMLGAHWIE 728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00211 728 PANTHER PROLYL OLIGOPEPTIDASE-LIKE PROTEIN 1 728 - -
Tsu07g00211 728 PANTHER PROLYL ENDOPEPTIDASE 1 728 - -
Tsu07g00211 728 SUPERFAMILY alpha/beta-Hydrolases 448 672 IPR029058 -
Tsu07g00211 728 Pfam Prolyl oligopeptidase, N-terminal beta-propeller domain 11 426 IPR023302 GO:0004252
Tsu07g00211 728 SUPERFAMILY Peptidase/esterase 'gauge' domain 7 439 - -
Tsu07g00211 728 Gene3D - 78 437 - -
Tsu07g00211 728 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 505 529 IPR002470 GO:0004252|GO:0006508
Tsu07g00211 728 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 563 583 IPR002470 GO:0004252|GO:0006508
Tsu07g00211 728 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 533 552 IPR002470 GO:0004252|GO:0006508
Tsu07g00211 728 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 478 496 IPR002470 GO:0004252|GO:0006508
Tsu07g00211 728 PRINTS Prolyl oligopeptidase serine protease (S9A) signature 645 667 IPR002470 GO:0004252|GO:0006508
Tsu07g00211 728 ProSitePatterns Prolyl endopeptidase family serine active site. 540 570 IPR002471 GO:0004252|GO:0006508
Tsu07g00211 728 Gene3D alpha/beta hydrolase 19 718 IPR029058 -
Tsu07g00211 728 Pfam Prolyl oligopeptidase family 493 724 IPR001375 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00211 Tsu-Chr7 1576191 1581870 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00211 478 610 Carbohydrate Esterase AT5G36210 29.630 3.11e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00211 K01322 - gmx:100776544 1312.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00211 07 1576191 1581870 Tsu07g00211 07 1576191 1581870 ECH
Tsu01g00159 01 1242927 1246880 Tsu07g00211 07 1576191 1581870 PCT