Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00184 ATGCTCACATCTTTGTCCATGATTATTCAAAGGGTTTGCCGCAGCTTGCGAGTTATAACAGATAAGGAATTGGATAAAGATAACTTATCATCTAATGAAGTGATGGCCGTTACTGATGGTCAATTTGCTACAAATGCAATTTGGTCGGAATCTCAACACAGGGGGATGGCTGCCTTATTGGGCGGTGAAGAAAAGTTTATTGAAACAATGGGTAGAAAATTCTCGGAACAAAGGTGGCAACAGGAAACTCTTACTTTAAAAGGAGATCTTGATTGTGGTAGGGCGCGTTCTCCTTCTGTGGAGGGTACTTTCTTGTCAAGTTTGGGAATAAATAGAACTGGAGAGAAAAGACGGGCTAAGGCAGAAAAAACTATCACTCTTCAAGTCCTTAGGCAATATTTCGCTGGAAGTCTAAAAGATGCTGCGAAAAATATTGGCGGTAAGCCTTATACACACACAAGCATTCCATCTTAG 474 0.4093 MLTSLSMIIQRVCRSLRVITDKELDKDNLSSNEVMAVTDGQFATNAIWSESQHRGMAALLGGEEKFIETMGRKFSEQRWQQETLTLKGDLDCGRARSPSVEGTFLSSLGINRTGEKRRAKAEKTITLQVLRQYFAGSLKDAAKNIGGKPYTHTSIPS 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00184 157 PANTHER PROTEIN NLP4 1 151 - -
Tsu07g00184 157 PANTHER PROTEIN NLP8 1 151 IPR045012 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00184 Tsu-Chr7 1387891 1388364 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00184 1 151 NLP Transcription Factor Family AT1G76350 37.179 6.55e-19 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00184 - - gmx:100790922 192.971
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00184 07 1387891 1388364 Tsu07g00184 07 1387891 1388364 ECH