Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00180 ATGGGAAACTGTTTGTCAAATTCAGGCGTTGACAATAAGATTCAGAAAAAGATCACTTCAACTACCTATAAACAACACAACAATACTTCTTCTGCAGATGATGAGAGAAGTACTGTTGGAGCAAAAATCGCGGCAGTGGAGAAGGAAAGAGGCGGGGAGAGGGCGGTTGGAAAAATTGTGACGCCCAATCTTAAAATGTTTACATTGGAAGAGTTGAAAAGTGCCACAAGAAACTTCAGACCAGACACGGTGCTTGGTGAGGGTGGTTTTGGGCGTGTTTTCAAAGGATGGATCGACAAAAACACTTTAAAACCATCTAAAATTGGTGTTGGAATTCCGGTTGCTGTTAAGAAGTCGAACGACGATAGTCTCCAAGGTTTACAAGAATGGCAGAGTGAAGTGAAATTTTTGGGAAAATTCTCTCATCCAAATCTTGTTAAACTAATTGGCTACTGCTGGGAGGAAAATCAATTCCTATTAGTCTACGAATGCATGCAAAAAGGCAGCTTGGAAAGTCATCTTTTCAGAAGCCCTGAACCACTTTCTTGGGAAATAAGGTTGAAGATTGCCATAGGAGCTGCCAAAGGTTTGGCTTTCTTGCACACTTCAGAAAAGTCTGTTATTTATAGAGACTTCAAGTCCTCCAACATTTTACTTGATGGGGACTTTAATGCAAAGTTGTCTGATTTTGGGTTGGCCAAGCTTGGGCCTGTAAATGGTAGATCACATGTAACCACAAGAATCATGGGCACATATGGTTATGCAGCTCCTGAGTACATGGCTACAGGTCATCTATATGTGAAAAGTGATGTATATGGATTTGGTGTTGTGCTTCTAGAAATGTTAACAGGTTTAATAGCATTGGATCCAAATAGGCCAACACATGAGATGAATTTGGTGGAATTTACAAAGAGTTCTCTAAGTGACAAAAagaaactcaaaaaaataatggatcagAGGTTGGACAAAAATTATCCATTAACATCAGCATTTGTAATAGCCCAAGTTATACTCAAATGTTTAGAATCTGACCCAAAAAATAGACCATCTATGGAACAAGTATTGGAAACTTTAGAAAGGGCTCAAACCATCAAAGTTAAACCTAAAGTGAAGAAATCAAGAAGTTCTGTGCATCAAACATAA 1143 0.3815 MGNCLSNSGVDNKIQKKITSTTYKQHNNTSSADDERSTVGAKIAAVEKERGGERAVGKIVTPNLKMFTLEELKSATRNFRPDTVLGEGGFGRVFKGWIDKNTLKPSKIGVGIPVAVKKSNDDSLQGLQEWQSEVKFLGKFSHPNLVKLIGYCWEENQFLLVYECMQKGSLESHLFRSPEPLSWEIRLKIAIGAAKGLAFLHTSEKSVIYRDFKSSNILLDGDFNAKLSDFGLAKLGPVNGRSHVTTRIMGTYGYAAPEYMATGHLYVKSDVYGFGVVLLEMLTGLIALDPNRPTHEMNLVEFTKSSLSDKKKLKKIMDQRLDKNYPLTSAFVIAQVILKCLESDPKNRPSMEQVLETLERAQTIKVKPKVKKSRSSVHQT 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00180 380 PANTHER OS01G0588500 PROTEIN-RELATED 27 376 - -
Tsu07g00180 380 Gene3D Transferase(Phosphotransferase) domain 1 165 378 - -
Tsu07g00180 380 CDD STKc_IRAK 85 360 - -
Tsu07g00180 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 207 219 IPR008271 GO:0004672|GO:0006468
Tsu07g00180 380 ProSitePatterns Protein kinases ATP-binding region signature. 85 118 IPR017441 GO:0005524
Tsu07g00180 380 Pfam Protein tyrosine and serine/threonine kinase 83 358 IPR001245 GO:0004672|GO:0006468
Tsu07g00180 380 Gene3D Phosphorylase Kinase; domain 1 63 164 - -
Tsu07g00180 380 PANTHER SERINE/THREONINE-PROTEIN KINASE CX32, CHLOROPLASTIC-RELATED 27 376 - -
Tsu07g00180 380 SUPERFAMILY Protein kinase-like (PK-like) 64 368 IPR011009 -
Tsu07g00180 380 ProSiteProfiles Protein kinase domain profile. 79 364 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00180 Tsu-Chr7 1344010 1346417 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00180 58 358 Glycoside Hydrolase AT3G07070 47.557 2.19e-90 276
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Tsu07g00180 PK_Tyr_Ser-Thr 6.6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00180 - - aprc:113865973 551.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00180 07 1344010 1346417 Tsu07g00180 07 1344010 1346417 ECH