Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00173 ATGGAAGCAGAACacgataataataataataataataataattcctcAAAATCAAATGGAGGAATTATTGGAGCAGGAGCAGGAGGAAGCTGCAGCAGCCTTTATGTGAAAGTGATGACCGATGAACAATTGGAACTTCTCCGACAACAGATTTCTGTTTACACTACCATTTCTGACCAACTTGTTCAGATGCACAAATCCATCACCTCTCAACACGACCTTGCAGGACTGAGGTTGGGTAATTTGTATTGTGATCCACTGATGGCATGCTCTGGACATAAGATAACTTCTCGGCAGCGTTGGACACCGACCCCTCTCCAGCTTCAAATACTCGAGCGCATTTTCGATGAAGGGAATGGAACTCCCTCCAAACAGAAGATCAAAGATATAACCAATGAACTCGGGCAACACGGTCAAATATCTGAGACTAATGTTTATAATTGGTTCCAGAATAGAAGAGCTCGTTCAAAGCGTAAGCAATCGGCTTCTACAACAAATCAATTAGAACTAGAGCCAGAGACAGAAGTTGAGTCTCCAAAAGATAACAAAACACGCGAAGATTGCGATTATGTTCAATTCTTTGAGAATTTATCACCTTATAGTGTCAAGGATTTGCACATTCAAAGTCCTGACATAGGATTTGAGCACTTGTTGAGTAAAATTGAAGTTTCAGGCTGCTATAGTTCTTACTTTCTTTGA 699 0.3934 MEAEHDNNNNNNNNSSKSNGGIIGAGAGGSCSSLYVKVMTDEQLELLRQQISVYTTISDQLVQMHKSITSQHDLAGLRLGNLYCDPLMACSGHKITSRQRWTPTPLQLQILERIFDEGNGTPSKQKIKDITNELGQHGQISETNVYNWFQNRRARSKRKQSASTTNQLELEPETEVESPKDNKTREDCDYVQFFENLSPYSVKDLHIQSPDIGFEHLLSKIEVSGCYSSYFL 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00173 232 MobiDBLite consensus disorder prediction 156 183 - -
Tsu07g00173 232 PANTHER WUSCHEL-RELATED HOMEOBOX 13 28 232 IPR044559 GO:0003700
Tsu07g00173 232 CDD homeodomain 98 160 IPR001356 GO:0003677
Tsu07g00173 232 PANTHER TRANSCRIPTION FACTOR HOMOBOX-WOX FAMILY-RELATED 28 232 - -
Tsu07g00173 232 SUPERFAMILY Homeodomain-like 97 162 IPR009057 -
Tsu07g00173 232 ProSiteProfiles 'Homeobox' domain profile. 94 159 IPR001356 GO:0003677
Tsu07g00173 232 SMART HOX_1 96 163 IPR001356 GO:0003677
Tsu07g00173 232 Pfam Homeodomain 98 158 IPR001356 GO:0003677
Tsu07g00173 232 Gene3D - 99 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00173 Tsu-Chr7 1298793 1299944 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00173 4 160 Wox Gene Family AT4G35550 66.879 5.88e-71 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Tsu07g00173 Homeodomain 1.6e-18 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00173 - - var:108342525 316.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Tsu07g00173 07 1298793 1299944 Tsu07g00173 07 1298793 1299944 ECH