Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00133 ATGACTAGTAACTCTCCAACACAATCTCCACCCGATTCATCACAATCACCGCCGTCGCCACCACCACCGGTGGCTGATAATTCCTCTCCACCACCACCGGTGGCTGATAATTcctctccaccaccaccaccaccaaaaaCTGATAATTCGTCTCCACcaccacctccatcatcacctCCTCCGTCTTCTCCACCACCATCTTCACCTCCTCCGTCATCTCCACCTCCTTCTGACTCTTCTCAATCTCCACCATCACCatcaccatcaccaccaccaccaccaccaccaccaccaccaccgtcACAATCACAGTCACCTCCTAGCAACAAGCCATCTCCTCCTAAATGGGAAGTGTTTTCTCCTCCACCACCACAGCGCCATCATTCGTCCTCGCCAAAGTCATTGGACTCGAATAAGAATGATAATACACAGGATGAAGGTGGGAATGATTTGAGTGCGGGAACTATAATAGGAGTTGCAGGTGCAGCTGGTTTATTGCTCCTTGTCGTTATCACACTCTTCATTGTATGTTCAAAAAGGAAGAAGAGACCAAATCCTCACATTCAGTACTACAGCAATCAACCACCAgGCGATGGTCATAATCAATATACATACAATAAAGGCGATGTATACAATAAGGGTGACCACGTGCTTAATATTACTCCACCATCTCAAGGTGGAGGTTGGGGTCCACCAACACCAACAACCAATCAACCACCGCAACGTATTAGCAGTGACTTAAGCAACTCCAGTTACTCTGGGTCGCACGGTCCAGTATTGCCACCACCACATCCAACCGTTGCACTTGGGTTCAACCAAAGCTCATTCACCTTTGATGAGTTATCAGCTGCTACTAATGGATTTGCCAAACAAAACTTGTTAGGTCAAGGTGGGTTTGGATATGTACATAAAGGTGTTCTTCCTAATGGTAAGGAAATAGCAGTGAAGAGCCTTAAATCAACTGGTGGACAAGGTGATAGAGAGTTTCAAGCTGAGGTTGACACTATCAGCCGTGTCCATCATCGCTATCTTGTTTCGCTTGTTGGATATTGCATTAGTGATTCTAAAAAGCTTCTCGTTTATGAATTTGTTCCTAACAAGACCCTTGATTATCACCTTCACGGAAAGGGTCGACCTGTGATGGATTGGGGCACAAGGCTTAAAATTGCGATTGGATCGGCCAAAGGGCTTGCTTATTTACATGAGGATTGTCACCCTCGTATCATTCACAGAGACATAAAGGGTGCAAACATTTTACTtgaaaataactttgaagcaAAAGTGTCAGATTTTGGATTGGCAAAGTTTAGTCAAGACACTCACACTCATGTTTCTACTCGTGTCATGGGAACATTTGGGTACATGGCTCCTGAGTATGCATCAAGTGGTAAGCTAACTGACAAATCTGATGTCTTCTCCTATGGTATCATGCTTTTAGAACTCATAACAGGACGGCGTCCAGTCGGTAACACCGGTGATTATGAAGAAGACAGTTTGGTTGATTGGGCTAGACCACTTTGTGCAAAAGCATTGGAGAATGAAATATTTGTTGGATTGGTGGATATACGTTTAGAGGACAATTATGACAAACATGAGATGAAACGTATGATAGCTTGTGCTGCTGCTAGTGTTAGGCACTCAGCAAGACGGCGTCCAAGAATGAGCCAGATTGTGCGTGTGCTGGAGGGAGATGCATCACTAGATCAAGTGCTTAGTTATGATGGAGTTAAACCGAGTGCTTTGCAGAGCATTCCAAGTGGAGATTATGATTCTGGGTCTTACATTTCTGATATGAAAAAGTTCAAGAAACTACCATTGGACAGCGGCGTCGCCCCAAGCAGTGAGTTCGGTGGAACAAGTGAGTATGGCCTCAATCTTTCTGCCTCAAGCAGTGATCAATCTTCTGCTGAATATAGCAAAAGGACTGTAACTGAATCAGGAAGTAGGAACTACACTCCGCGGGATCGTAGGTCTGGGAATCGAAAGTCTGTGCAACAGCATCATATTTTGGAATGCTTGGCTACATGGAAGGAAACAAATGGTCTCGCCAAGTTAGTTGATCGTGTGTTGGGCAGTCACAGACAGAATGGTCATGATTATGGGAAACATAATATTGAGAAGGAAACTAAAAAGATTAGCACTAACATCAAGCAATGTCTTCGTAAGGTGGCAGATAGGCACTTCACAGCGGTTGTGAAGGTGCTGGGGTCATCTGGAGTAGCCCCATACAATGAAGACACCATGAAAATGTTGGGGGATAAACATCCATACAAGCCACCTCCCTCCGTGCCGACTACCTTGTTTTCTGAAGCTCCTCTGGTGGTTGATGTTGACACTGTTTTCAGATGTATTCACTCATTCCCTAAAGGAACATCGTGTGGCAGAGACGGAAGATGTCCCAAGAGTTTGTCAGAGTTTGTGGCTTCCAAACCTTTGACACCGTTATTAAAGCCAGATGGTGGGATACACCCTATTGCTGTAGGCACTACTTGGAGGCGTCTGGTATCCAAGGTTGCTATGAAAGGAGTCGATAAAGATATGACTAAATATCTTAATGACTTTCAGTTTGGGGTTGGGATATCAGGTGGTGCAGAGGCCATTTTGCATAGTGTCAATAGGGTGTTGAGCGAGCGACATGGAGATGGATCTTTGGCTATGCTCATAGAAGATTTTTCCAATGCTTTCAACATGGTAGACAGGTCGGCACTTCTGCGTGAGGTAAGAGTGAGATGTCCATCTATTTCTTTGTGGGTTGAGTTTCTTTATGGTCAGGAAGCGAGGTTATATATTGGGGATGAACATTTTATGTCAGCCACTGGGGCGATTCAAGGGAAGTGGCTAAATCACTTGATATCATCCGAGAGACAGGCCCATGATTGGGTTGATTTAAATATTCGTAAGACTGAGATATTTTGGCCTTCATGTGATGGAAATAAACTCCGTGAGGGGTTGTTTCCTTCGGATATTGGGAGACCGGAGTTGGGGGTGAAATTACTCGGAGGGGCTATTAGTCGAGATAAATGTTTTATCGAGGGGGTTGCCATGAAGAGAGCTGTTAGGGTTGTTGAGgtaatgcatcttcttcctcgGTTAAGGGACCCACAGAGTGAGCTTCTTTTACTTCGTTCATACATGGGTATTGCAAAACTATTTTTTGGCCTAAGGACGTGTCAACCAGTTTACACTAAAGATACaactattttgtttgataaagagttgcGTGGTGCGGTTGAAGACATTGTGGTTGGTGGAGGCCCTTTCTTTGGGGATTTTCAATGGAGGATAACTTTCTTACCTATTAAGGCTGGGGGATTGGGATTGTACTCAGTAGTAGAGGCAAGCTCTTATGCTTTTGTGGCTTCTAGAGCTCAGTCTTGGGTGTTGCAAGAACACATATTGAGGGGTAGTGGAGTATGTGGCATGGACGCTGATTTTTACAATGCTTTGGATGGTCTCCGTGATATGATTCCAACTTTTAACTTTAGCAGTTTCACTAGCAAGgacaccgtcccccctaaagcccaacatgttttggcgagtgccctgtttagtaaaattgttaaggaCATGGAAGTTAACTTTCAAATGACCATCAGACAGAAATCAGTTTTTGGATGCTTACAGGCGGCCCATGCTCAAGATTTTTTGCTAGCTATCCCAATTGACGGATTAGGCCAACATATGTCCCCGGTAGAGTATCGCACTATTCTCAAATATCGTCTGATGATTCCTTTATTTCCTGCTGATGAGaaagagacacctgtgaacttcttgactgacccactggAGGGAAGATCTACATTGAGGCCAGCCGATGTTTTGGTGTACGGCTGGCAAGCAGCCGAGTTGTCTTCTGTCATGGTCTTTGCAGCATGTCAGCAAGGTAGTGCGGCTGATAGAGTATTTGCTTTGTGTCAGAATGAGGATTATGCCACCATAGATCCCTCAGATTCAGCTACGGTCATGGCTCAGCAACTCGTTAAGAAAGACGATGACCGCGACGACGAAGCCGAGTATTCCCCTTTCATGGGAATCGAAAAGGGGGCGGTTCTTCAAGAGGCAAGGGTTTTTAATGATCCACAACTTGATGCTAGGAGATGTTCACAGgttATTACAAAGCTTCTGTACCTACTGAATCAGGGAGAGACATTTACAAAGACCGAAGCCACAGAAGTTTTCTTTGCTGTGACTAAGCTTTTCCAGTCCAAAGATATGGGATTAAGGAGAATGGTCTACCTGATGATAAAGGAGATCTCTCCGTCTGCAGACGAGGTTATTATTGTTACAAGCTCTCTCATGAAGGACATGAATAGCAAGATTGATATGTATAGGGCCAATGCTATTCGAGTGCTTTGTCGTATCACAGACGGAACCCTCCTTGCCCAAATCGAACGGTATTTGAAACAAGCAATTGTAGATAAGAATCCAGTTGTAGCAAGTGCTGCCTTAGTTAGTGGCATTCATCTACTCCAGACAAatcctgaaattgtaaaaaggTGGAGCAATGAAGTTCAGGAAGCTGTTCAATCAAGAGCAGCTCTTGTACAGTTTCATGCACTGGGTTTGCTACACCAGATACGGCAGAATGATCGGCTGGCTGTTAGCAAGCTTGTTACCAGCTTGACAAGGGGAACTGTTCGCTCACCTTTAGCCCAGTGCCTGTTGATCCGTTACACAAGTCAGGTTATCTGTGAGTCGGGAAATAATACACAGTCAGGGGATCGCCCCTTCTATGATTATCTTGAGAGTTGCCTTCGTCACAAGTCAGAGATGGTGATTTTTGAAGCTGCCAGGGCTATTACAGAGCTGAATGGTGTAACAACCCGAGAATTAACTCCAGCTATTACTGTTCTTCAGCTATTCTTAAGTTCTTCTAAGCCAGTTCTAAGATTTGCTGCTGTCCGCACCTTGAACAAGGTGGCAATGACACACCCAACATCAGTCACTAACTGCAACATTGATATGGAAAGTTTAATCTCCGATCAGAACAGAAGCATTGCCACACTTGCTATTACTACACTTTTGAAGACAGGAAATGAATCAAGTGTGGACCGTCTTATGAAACAGATTACAAATTTCATGTCTGATATTGCTGATGAGTTcaaaattgttgttgttgaagcaATAAGATCATTGTGCCAGAAATTCCCATTAAAATATAGATCTTTGATGAACTTCCTAAGTAACATTCTTAGAGAAGAAGGTGGTTTTGAGTACAAGAAGGCAATTGTAGATTCAATTGTGATTCTCATTAGAGAAATCCCTGATGCAAAGGAAACTGGGTTGCTTCATCTCTGTGAGTTCATTGAAGATTGCGAGTTCACTTATCTGTCTACACAGATTCTACACTTCCTGGGAATTGAAGGGCCAAAAACATCAGACCCGAGCAAATATATTCGTTTCGTTTATAATCGAGTACATCTTGAGAACGCAACAGTTAGGGCCGGTGCGGTGAGCACACTGGCAAAGTTTGGTGCTGCAGTTGATGAGTTAAAGCCTCGCATATTTGTGCTGCTAAGGCGATGTCTTTTTGACAGTGACGATGAGGTCCGTGATAGAGCAACCCTTTATCTAAACACACTTGGAGGTGATGGTTCTGTTGTTGAGACTGATAAAGCTGTAAAGGATTTCCTGTTTGGGCCATTTGATGTCCCACTTGTCAATCTGGAGACTAGTTTGAAAAATTATGTGCCTTCAGAAGAGGCATTTGACATTGACTCTGTGCCCAAGGAAGTCAAATCTCAGCCACTTGCAGAGAAGAAAGCCCCTGGTAAAAAGCCAACTGGTTTGGGTGCTCCTCCAAGTGGTCCCCCATCAACTGCTGATGCATACCAGAGGGTGCTTTCGTCCATTCCAGAGTTTGCTAACTTTGGGAACCTTTTTAAGTCCTCAGAACCTGTGGAGCTCACTGAAGCTGAGACAGAATATGCAGTTAATGTTGTTAAACACATTTTTGATCGGCATGTTGTGTTCCAGTACAACTGCACAAACACGATACCAGAGCAATTATTAGAACATGTTATTGTAATTGTGGATAGTTCAGAAGCAGATGAATTTTCGGAGGTGTTCTCCAAACCTCTCAAGTCTCTTCCTTATGATTCACCTGGACAGATTTTTGTGGCATTTGAGAAGCCTGAGGGAGTGGCAACACTTGGAAAATTTTCTAACGTTTTGAAATTTATTGTTAGAGAGGTTGACCCAACCACTGGTGAGGCAGATGATGATGGTGTTGAAGATGAATACCAGCTGGAGGATCTGGACATTGTTTCAGCAGATTACACGTTAAAAGTGGGGGTATCTAATTTCAGGAATGCATGGGAAAGCTTGGGCCCTGATTATGAGCGAGTGGATGAATATGGTCTTGGTCCTAGGGAGAGCTTGGCTGAAGCTGTAAATACTGTCATCAACCTTCTTGGCTTGCAGCCCTGTGAGGGTACAGAGGCTGTTCCACCCAATTCAAGATCACATACATGTTTGTTGTCAGGTGTATTCATAGGTAATATAAAGGTGCTTGTGCGGTTGTCTTTTGGACTAGATGGTCCAAAGGATGTTGCAATGAAATTGACGGTCAGATCCGAGGATGAAACCGTCAGTGATGCCATTCATGAGATTGTAGCTAGCGGATAA 6627 0.4201 MTSNSPTQSPPDSSQSPPSPPPPVADNSSPPPPVADNSSPPPPPPKTDNSSPPPPPSSPPPSSPPPSSPPPSSPPPSDSSQSPPSPSPSPPPPPPPPPPPSQSQSPPSNKPSPPKWEVFSPPPPQRHHSSSPKSLDSNKNDNTQDEGGNDLSAGTIIGVAGAAGLLLLVVITLFIVCSKRKKRPNPHIQYYSNQPPGDGHNQYTYNKGDVYNKGDHVLNITPPSQGGGWGPPTPTTNQPPQRISSDLSNSSYSGSHGPVLPPPHPTVALGFNQSSFTFDELSAATNGFAKQNLLGQGGFGYVHKGVLPNGKEIAVKSLKSTGGQGDREFQAEVDTISRVHHRYLVSLVGYCISDSKKLLVYEFVPNKTLDYHLHGKGRPVMDWGTRLKIAIGSAKGLAYLHEDCHPRIIHRDIKGANILLENNFEAKVSDFGLAKFSQDTHTHVSTRVMGTFGYMAPEYASSGKLTDKSDVFSYGIMLLELITGRRPVGNTGDYEEDSLVDWARPLCAKALENEIFVGLVDIRLEDNYDKHEMKRMIACAAASVRHSARRRPRMSQIVRVLEGDASLDQVLSYDGVKPSALQSIPSGDYDSGSYISDMKKFKKLPLDSGVAPSSEFGGTSEYGLNLSASSSDQSSAEYSKRTVTESGSRNYTPRDRRSGNRKSVQQHHILECLATWKETNGLAKLVDRVLGSHRQNGHDYGKHNIEKETKKISTNIKQCLRKVADRHFTAVVKVLGSSGVAPYNEDTMKMLGDKHPYKPPPSVPTTLFSEAPLVVDVDTVFRCIHSFPKGTSCGRDGRCPKSLSEFVASKPLTPLLKPDGGIHPIAVGTTWRRLVSKVAMKGVDKDMTKYLNDFQFGVGISGGAEAILHSVNRVLSERHGDGSLAMLIEDFSNAFNMVDRSALLREVRVRCPSISLWVEFLYGQEARLYIGDEHFMSATGAIQGKWLNHLISSERQAHDWVDLNIRKTEIFWPSCDGNKLREGLFPSDIGRPELGVKLLGGAISRDKCFIEGVAMKRAVRVVEVMHLLPRLRDPQSELLLLRSYMGIAKLFFGLRTCQPVYTKDTTILFDKELRGAVEDIVVGGGPFFGDFQWRITFLPIKAGGLGLYSVVEASSYAFVASRAQSWVLQEHILRGSGVCGMDADFYNALDGLRDMIPTFNFSSFTSKDTVPPKAQHVLASALFSKIVKDMEVNFQMTIRQKSVFGCLQAAHAQDFLLAIPIDGLGQHMSPVEYRTILKYRLMIPLFPADEKETPVNFLTDPLEGRSTLRPADVLVYGWQAAELSSVMVFAACQQGSAADRVFALCQNEDYATIDPSDSATVMAQQLVKKDDDRDDEAEYSPFMGIEKGAVLQEARVFNDPQLDARRCSQVITKLLYLLNQGETFTKTEATEVFFAVTKLFQSKDMGLRRMVYLMIKEISPSADEVIIVTSSLMKDMNSKIDMYRANAIRVLCRITDGTLLAQIERYLKQAIVDKNPVVASAALVSGIHLLQTNPEIVKRWSNEVQEAVQSRAALVQFHALGLLHQIRQNDRLAVSKLVTSLTRGTVRSPLAQCLLIRYTSQVICESGNNTQSGDRPFYDYLESCLRHKSEMVIFEAARAITELNGVTTRELTPAITVLQLFLSSSKPVLRFAAVRTLNKVAMTHPTSVTNCNIDMESLISDQNRSIATLAITTLLKTGNESSVDRLMKQITNFMSDIADEFKIVVVEAIRSLCQKFPLKYRSLMNFLSNILREEGGFEYKKAIVDSIVILIREIPDAKETGLLHLCEFIEDCEFTYLSTQILHFLGIEGPKTSDPSKYIRFVYNRVHLENATVRAGAVSTLAKFGAAVDELKPRIFVLLRRCLFDSDDEVRDRATLYLNTLGGDGSVVETDKAVKDFLFGPFDVPLVNLETSLKNYVPSEEAFDIDSVPKEVKSQPLAEKKAPGKKPTGLGAPPSGPPSTADAYQRVLSSIPEFANFGNLFKSSEPVELTEAETEYAVNVVKHIFDRHVVFQYNCTNTIPEQLLEHVIVIVDSSEADEFSEVFSKPLKSLPYDSPGQIFVAFEKPEGVATLGKFSNVLKFIVREVDPTTGEADDDGVEDEYQLEDLDIVSADYTLKVGVSNFRNAWESLGPDYERVDEYGLGPRESLAEAVNTVINLLGLQPCEGTEAVPPNSRSHTCLLSGVFIGNIKVLVRLSFGLDGPKDVAMKLTVRSEDETVSDAIHEIVASG 2208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00133 2208 Gene3D - 1344 1637 IPR011989 -
Tsu07g00133 2208 MobiDBLite consensus disorder prediction 219 265 - -
Tsu07g00133 2208 PANTHER COATOMER SUBUNIT GAMMA 1322 2208 IPR017106 -
Tsu07g00133 2208 Gene3D Phosphorylase Kinase; domain 1 265 363 - -
Tsu07g00133 2208 MobiDBLite consensus disorder prediction 1911 1941 - -
Tsu07g00133 2208 ProSiteProfiles Protein kinase domain profile. 288 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00133 2208 PANTHER COATOMER SUBUNIT GAMMA 1322 2208 - -
Tsu07g00133 2208 SUPERFAMILY Clathrin adaptor appendage domain 1938 2092 IPR013041 -
Tsu07g00133 2208 Gene3D - 2090 2206 IPR012295 -
Tsu07g00133 2208 SUPERFAMILY Subdomain of clathrin and coatomer appendage domain 2093 2205 IPR009028 GO:0006886|GO:0016192|GO:0030117
Tsu07g00133 2208 ProSitePatterns Serine/Threonine protein kinases active-site signature. 408 420 IPR008271 GO:0004672|GO:0006468
Tsu07g00133 2208 Pfam Adaptin N terminal region 1350 1861 IPR002553 GO:0006886|GO:0016192|GO:0030117
Tsu07g00133 2208 MobiDBLite consensus disorder prediction 650 664 - -
Tsu07g00133 2208 MobiDBLite consensus disorder prediction 627 664 - -
Tsu07g00133 2208 SUPERFAMILY Protein kinase-like (PK-like) 268 561 IPR011009 -
Tsu07g00133 2208 MobiDBLite consensus disorder prediction 627 649 - -
Tsu07g00133 2208 Gene3D - 1656 1877 IPR011989 -
Tsu07g00133 2208 Gene3D Coatomer, gamma subunit, appendage domain 1938 2089 IPR037067 GO:0005198|GO:0006886|GO:0016192|GO:0030126
Tsu07g00133 2208 ProSitePatterns Protein kinases ATP-binding region signature. 294 316 IPR017441 GO:0005524
Tsu07g00133 2208 MobiDBLite consensus disorder prediction 11 128 - -
Tsu07g00133 2208 Pfam Coatomer subunit gamma-1 C-terminal appendage platform 2091 2205 IPR032154 -
Tsu07g00133 2208 Gene3D Transferase(Phosphotransferase) domain 1 364 572 - -
Tsu07g00133 2208 MobiDBLite consensus disorder prediction 239 256 - -
Tsu07g00133 2208 SUPERFAMILY ARM repeat 1351 1861 IPR016024 -
Tsu07g00133 2208 MobiDBLite consensus disorder prediction 1 147 - -
Tsu07g00133 2208 Pfam Coatomer gamma subunit appendage platform subdomain 1943 2088 IPR013040 GO:0005198|GO:0006886|GO:0016192|GO:0030126
Tsu07g00133 2208 Pfam Protein tyrosine and serine/threonine kinase 291 560 IPR001245 GO:0004672|GO:0006468
Tsu07g00133 2208 MobiDBLite consensus disorder prediction 129 147 - -
Tsu07g00133 2208 SMART serkin_6 288 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00133 Tsu-Chr7 934075 950448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00133 148 640 Trihelix Transcription Factor Family AT1G70460 49.799 1.69e-137 446
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Tsu07g00133 Adaptin_N 5.4e-128 CL0020
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00133 K17267 - gmx:100791801 1630.54