Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00130 ATGAAAGTTCGTATTGTTCATTTGTGGACCGTACCCGATAAAGCAAACCCCGCTGAGGATGGAAGTATTCATATGCTTTTGGTTGATGATAAAgGTGGAAAAATTCAGGCCAGTGTCCGAAAATTCATGATTAGCAAATTTAAGGGGCAACTTGAAGAAGGTTGTGTTTATGTGATTGAAAAATTCATGGTTGCTAGCAACGACCCTAACTATAAAGCTACCGGACATAAGTATAAGTTAAACTTTATGAATTCgacaaatattttcaaagtCACTGCTCTTGAAATCCCTCgatatcattttgattttgttgttttctcTGAAGTTTTGGAAGCAACCAAAGAGGAAATATTGCTTGATATCATTGGTCATATTGTGGGGAAGACCGATTTGAAGGAATTGGCAAAAAATGGCAAAACGAGCAAAATCATTGATCTAGAGCTTGAGGATTTAGAGTAG 459 0.3399 MKVRIVHLWTVPDKANPAEDGSIHMLLVDDKGGKIQASVRKFMISKFKGQLEEGCVYVIEKFMVASNDPNYKATGHKYKLNFMNSTNIFKVTALEIPRYHFDFVVFSEVLEATKEEILLDIIGHIVGKTDLKELAKNGKTSKIIDLELEDLE 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00130 152 Pfam Domain of unknown function DUF223 25 113 IPR003871 -
Tsu07g00130 152 CDD RPA1_DBD_A_like 1 88 - -
Tsu07g00130 152 Gene3D - 94 152 IPR012340 -
Tsu07g00130 152 PANTHER DNA BINDING PROTEIN-LIKE 21 109 - -
Tsu07g00130 152 SUPERFAMILY Nucleic acid-binding proteins 2 91 IPR012340 -
Tsu07g00130 152 Gene3D - 1 93 IPR012340 -
Tsu07g00130 152 PANTHER NUCLEIC ACID-BINDING, OB-FOLD-LIKE PROTEIN 21 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00130 Tsu-Chr7 916984 917641 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00130 1 151 Core DNA Replication Machinery Family AT4G19130 21.935 3.77e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00130 - - mtr:MTR_6g465570 196.438