Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00129 ATGGCACCTTCCGCCAATTCCCCCGGCGGTGCCGTGCCGTTGCTAACAAAACAAACCTTAGGTCTCAAATTCTACTACTTAATCCTCATTTTCGTCGCAATCTTAATCGCAGTTATTCTCCTAATCGTTATCTGCATTCGCCGGAATCGAAGCACAAAAAAGAGCAAAATGCGAGTGAAGCATAGTTCCGGCACAATTCCACTTGTTTCTAAAGAGATCGTGGAAGTGATAAAGATCGAACAACGTCTTGATGATGAATCGAAGATGCAGAAGCAAGTAAAGTGTGAGATCGAAGAGTGTAGTAGTGTGTCGGTGGAGTCTCCATCTCAGAACATAGGTTGGGGACGGTGGTATAGTCTGAAGGAATTGGAGAATGCGACGGATGGATTTACTGAAGGGAACGTGATCGGAGAAGGAGGTTATGGAATTGTGTACAGAGGAATTTTACAAGACGGTTCTGTGGTTGCTGTGAAGAATCTTCTTAACAATAAGGGTCAAGCAGAGAAAGAGTTTAAGGTGGAAGTTGAAGCCATTGGAAAAGTGAGGCATAAGAATTTGGTTGGATTAGTTGGATATTGTGCGGATGGCGCTCAAAGGATGCTTGTTTATGAATATGTTGACAATGGAAATTTGGAGCAGTGGTTGCATGGTGATGTAGGACCTGTTAGCCCCTTGACTTGGGATATACGAATGAAGATTGCTGTTGGCACTGCAAAAGGGCTAGCCTATTTGCACGAAGGCTTAGAACCCAAAGTTGTCCACCGAGATGTAAAATCCAGCAATATTCTCTTGGACAAAAAATGGAATGCCAAAGTATCAGACTTTGGACTTGCTAAGCTCTTAGGGTCTGGGAAAAGCTATGTGACAACACGTGTAATGGGGACATTTGGATATGTTTCACCTGAGTATGCAAGCACAGGTATGCTTAATGAGGGCAGTGATGTGTATAGTTTTGGGATTCTACTCATGGAGCTAGTGACAGGAAGAAGTCCCATTGATTATTCTAGAGCACCTGCAGAGATGAACTTGGTTGATTGGTTTAAAGGAATGGTAGCAAGTCGTCGTGGTGATGAACTAGTTGATCCTTTGATCGAGATTCAGCCCTCTCCAAGATCTTTGAAGCGAGCTTTGCTGGTCTGTCTTCGCTGTATAGATTTGGATGCCAATAAGCGACCAAAGATGGGTCAAATTGTTCATATGCTTGAGGCAGATGATTTTCCCTTTCGTTCTGAACTTCGAACTAGAGAGAAAGATCACGTTCCCTCTCAAGTAGACCTTTCCAAAAAGATTCCGTATCCAACAAGACACGTGGAGCCCATATATAAAGCAAGCTGGAGATGA 1341 0.4348 MAPSANSPGGAVPLLTKQTLGLKFYYLILIFVAILIAVILLIVICIRRNRSTKKSKMRVKHSSGTIPLVSKEIVEVIKIEQRLDDESKMQKQVKCEIEECSSVSVESPSQNIGWGRWYSLKELENATDGFTEGNVIGEGGYGIVYRGILQDGSVVAVKNLLNNKGQAEKEFKVEVEAIGKVRHKNLVGLVGYCADGAQRMLVYEYVDNGNLEQWLHGDVGPVSPLTWDIRMKIAVGTAKGLAYLHEGLEPKVVHRDVKSSNILLDKKWNAKVSDFGLAKLLGSGKSYVTTRVMGTFGYVSPEYASTGMLNEGSDVYSFGILLMELVTGRSPIDYSRAPAEMNLVDWFKGMVASRRGDELVDPLIEIQPSPRSLKRALLVCLRCIDLDANKRPKMGQIVHMLEADDFPFRSELRTREKDHVPSQVDLSKKIPYPTRHVEPIYKASWR 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00129 446 Pfam Protein kinase domain 131 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00129 446 Gene3D Phosphorylase Kinase; domain 1 86 205 - -
Tsu07g00129 446 Gene3D Transferase(Phosphotransferase) domain 1 206 415 - -
Tsu07g00129 446 ProSitePatterns Protein kinases ATP-binding region signature. 136 158 IPR017441 GO:0005524
Tsu07g00129 446 CDD STKc_IRAK 136 402 - -
Tsu07g00129 446 PANTHER OS01G0323000 PROTEIN 100 417 - -
Tsu07g00129 446 ProSiteProfiles Protein kinase domain profile. 130 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00129 446 SMART serkin_6 130 408 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00129 446 PANTHER OS03G0227900 PROTEIN 100 417 - -
Tsu07g00129 446 SUPERFAMILY Protein kinase-like (PK-like) 113 422 IPR011009 -
Tsu07g00129 446 ProSitePatterns Serine/Threonine protein kinases active-site signature. 252 264 IPR008271 GO:0004672|GO:0006468
Tsu07g00129 446 PANTHER OS01G0323000 PROTEIN 16 92 - -
Tsu07g00129 446 PANTHER OS03G0227900 PROTEIN 16 92 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00129 Tsu-Chr7 906143 909888 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00129 27 402 Receptor kinase-like Gene Family AT4G02010 42.969 1.24e-93 296
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Tsu07g00129 Pkinase 4.8e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00129 - - gmx:100779420 698.353