Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00127 ATGGCAGAAGTTGAATACCGATGCTTTGTTGGTGGACTTGCTTGGGCCACCGACAACGACGCTCTCGAGAAAGCCTTTTCACAGTTTGGCCAAATCGTCGAATCGAAGGTCATCACCGATCGTGAGACTGGAAGATCGAGAGGATTTGGATTTGTGACGTTCGCGTCAGAGCAATCCATGAAAGACGCGATCGAAGGGATGAACGGTCAGGATCTAGATGGACGTAACATCACTGTCAACGAGGCTCAAAACCGCGGCAGTGGAGGCGGTGGTGGAGGAGGTGGATACCGGGGAGGCGGTGGCGGAGGATATAGTAGTGGTGGCGGCGGAGGATATAGTGGTGGCGGCGGTGGAGGTTATAACCGCGGTGGAGGAGGATATGGTGGAGGAGGAGGTGGCCGTCGTGAAGGAGGAGGCGGTGGATATGGTGGAGGAGGTGGTTATGGTGGAGGAGATGGTGGTTCCCGATACTCAAggggaggtggtggtggtggttctgACGGTGGAAACTGGAGGAATTAG 522 0.5268 MAEVEYRCFVGGLAWATDNDALEKAFSQFGQIVESKVITDRETGRSRGFGFVTFASEQSMKDAIEGMNGQDLDGRNITVNEAQNRGSGGGGGGGGYRGGGGGGYSSGGGGGYSGGGGGGYNRGGGGYGGGGGGRREGGGGGYGGGGGYGGGDGGSRYSRGGGGGGSDGGNWRN 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00127 173 PANTHER RNA-BINDING PROTEIN GRP1A, PUTATIVE, EXPRESSED-RELATED 2 132 - -
Tsu07g00127 173 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9 77 IPR000504 GO:0003723
Tsu07g00127 173 SUPERFAMILY RNA-binding domain, RBD 6 116 IPR035979 GO:0003676
Tsu07g00127 173 MobiDBLite consensus disorder prediction 123 173 - -
Tsu07g00127 173 PANTHER GEO13361P1-RELATED 2 132 - -
Tsu07g00127 173 SMART rrm1_1 7 80 IPR000504 GO:0003723
Tsu07g00127 173 Gene3D - 2 104 IPR012677 -
Tsu07g00127 173 MobiDBLite consensus disorder prediction 80 100 - -
Tsu07g00127 173 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 6 84 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00127 Tsu-Chr7 867395 868601 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00127 8 86 Eukaryotic Initiation Factors Gene Family AT2G23350 35.443 9.05e-08 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00127 - K13195 gmx:100777821 155.221