Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00126 ATGGCTTCAACTTCACTTAGCAAACATAAGCCTTGTGATTCAATTTGGACACCAAAACAGAATAAGTTGTTTGAAAAAGCACTTGCAAAATATGACAAAGATACCCCTGATCGTTGGCAAAATGTAGCAAAAGCAGTTGATGGTAAATCAGTTGAGGAAGTTAAGAAACACTATGAGTTACTCTTGGAGGATCTCAAACACATTGAGTCTGGTCATGTTCCAATTCCAAATTACAAAGTGTAG 243 0.3663 MASTSLSKHKPCDSIWTPKQNKLFEKALAKYDKDTPDRWQNVAKAVDGKSVEEVKKHYELLLEDLKHIESGHVPIPNYKV 80
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00126 80 ProSiteProfiles Myb-like domain profile. 16 62 IPR001005 -
Tsu07g00126 80 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 79 IPR044636 GO:0003700
Tsu07g00126 80 Pfam Myb-like DNA-binding domain 16 59 IPR001005 -
Tsu07g00126 80 ProSiteProfiles SANT domain profile. 11 66 IPR017884 -
Tsu07g00126 80 CDD SANT 16 62 IPR001005 -
Tsu07g00126 80 Gene3D - 12 75 - -
Tsu07g00126 80 SUPERFAMILY Homeodomain-like 14 70 IPR009057 -
Tsu07g00126 80 SMART sant 12 64 IPR001005 -
Tsu07g00126 80 PANTHER PROTEIN RADIALIS-LIKE 3 1 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00126 Tsu-Chr7 864130 864372 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Tsu07g00126 Myb_DNA-binding 5e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00126 - - gmx:100785292 142.895