Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00114 ATGGCTCCAAAGAAGGACAAAGCTCCACCACCTTCCTCAAAGCCCGCCAAATCCGGTGGTGGAAAGCAGAAGAAGAAGAAGTGGAGCAAGGGTAAGCAAAAGGAGAAGGTTAATAACATGGTGTTGTTTGATCAAGCTACTTATGATAAACTTTTGTCTGAGGCTCCCAAATACAAGCTCATTACTCCTTCTGTTCTCTCTGATCGTTTGAGGATTAACGGATCACTTGCAAGGAGAGCTATAAGAGATCTGATGGCTAGAGAGTCTAAAGACGAGATTATGGAACTACGCAAAGAGATGGATGAGAAGTATAAACAAAGTATAGAAGAACTGAAAGCAGATTGGAAAATCATTGCAAAAGTACAAAGTGAGATACTGGAGAAACAACTCCAATCATTTAGAGAGATTACCACTTTGAAGGAAGAAGTTGCTGTGAAGGAAGAGATTACCCTTTTGAAGGAAGAAGCTTTGAATGATGAAAGTGTGAAGGAAGCTGCTGTGAAGAAAGAGGAAGTTGTGAAGGAAAAAGCTAACTTGGCAATAACAAATATGTCTGCTATTTTGGATAATTATTCTCGCATCATAATGTCACTGGATGAGCTGGAAGCATGCGAAAGAGCACCTGAAAGTTGGTTTGTATGTGCTAATTGCCATTTAGCTAATAAGCCCGTAGATATTGAGGTTCCATATGCGGAACCACTACCTTAA 708 0.4025 MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLITPSVLSDRLRINGSLARRAIRDLMARESKDEIMELRKEMDEKYKQSIEELKADWKIIAKVQSEILEKQLQSFREITTLKEEVAVKEEITLLKEEALNDESVKEAAVKKEEVVKEKANLAITNMSAILDNYSRIIMSLDELEACERAPESWFVCANCHLANKPVDIEVPYAEPLP 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00114 235 Gene3D Cytochrome f large domain 202 232 IPR036826 -
Tsu07g00114 235 ProSiteProfiles Cytochrome f family profile. 192 231 IPR002325 GO:0005506|GO:0009055|GO:0015979|GO:0020037|GO:0031361
Tsu07g00114 235 PANTHER 40S RIBOSOMAL PROTEIN S25 2 87 IPR004977 -
Tsu07g00114 235 MobiDBLite consensus disorder prediction 1 33 - -
Tsu07g00114 235 PANTHER BNAA04G12260D PROTEIN 2 87 - -
Tsu07g00114 235 Coils Coil 86 110 - -
Tsu07g00114 235 Pfam S25 ribosomal protein 8 88 IPR004977 -
Tsu07g00114 235 Gene3D - 21 110 - -
Tsu07g00114 235 SUPERFAMILY Cytochrome f, large domain 206 231 IPR036826 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00114 Tsu-Chr7 770014 773323 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00114 1 89 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 92.135 2.05e-39 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00114 K02975 - zju:107434163 121.324