Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00109 ATGGGATTTGGTAGAAAAATAATAGTATGCTTGTTGATGATCATCACAATAGGGTGTAATGAGACTGTTGGTAGAGAACCTGTGCTGCATAGGGTTGGAGGTGGAAGGTATACATGGAAACCAAAAATTAACTTCACACAATGGGCAAGTAATGAGACTTTCTACAAGGATGATTGGTTATattttggttttgataaGCACATTTATAATGTTCTTGAggtgaacaaaacaaattatgagAAATGTATTGAGACTGACTACATAAGTAATATCACTAGAGGAGGAAGAGATGTTTTCCAACTTTCAGAAGAGAGGACATATTACTTTCTATGTGGTAGAGGCTTTTGCTTTCAAGGAATGAGGGTTGAAATAAATGTTGAACCACTTCAACTACCACAACTTCCTCCTCCAACAATTTCGAACAAGGCCGGCTCATCAAGAAAAATGAATTACAATATATTCGTGATGCTTTTAGTCATTGCTTTGGCGTGGATCTTTGTGTAG 504 0.3452 MGFGRKIIVCLLMIITIGCNETVGREPVLHRVGGGRYTWKPKINFTQWASNETFYKDDWLYFGFDKHIYNVLEVNKTNYEKCIETDYISNITRGGRDVFQLSEERTYYFLCGRGFCFQGMRVEINVEPLQLPQLPPPTISNKAGSSRKMNYNIFVMLLVIALAWIFV 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00109 167 SUPERFAMILY Cupredoxins 29 126 IPR008972 -
Tsu07g00109 167 PANTHER BLUE COPPER PROTEIN 5 163 IPR039391 GO:0009055
Tsu07g00109 167 ProSiteProfiles Phytocyanin domain profile. 28 128 IPR003245 GO:0009055
Tsu07g00109 167 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 19 - -
Tsu07g00109 167 Gene3D - 28 130 IPR008972 -
Tsu07g00109 167 Pfam Plastocyanin-like domain 39 120 IPR003245 GO:0009055
Tsu07g00109 167 PANTHER EARLY NODULIN-LIKE PROTEIN 5 163 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00109 Tsu-Chr7 737901 738531 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00109 6 149 Phytocyanin Superfamily AT2G27035 49.306 3.33e-50 157
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00109 - - gmx:100789719 223.016