Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu07g00083 | ATGGACGGCGGCGAGGATCATTCTCACCAGGGAAGTACGTTAGTAATTCATCAAACCACCGAACAACTCATCGCCAGGTGCATAGCTCCCGTCAAAAAGAACTTCATTCGTCCACCTCCCGATCGAACTACTCCCTCTCAAAACGACGCCGTTTCCATCCCAAACGATAAACCCCCTCTTCTCGCCAAGGAGAAGAAATCTAAACGCCAACTCAAACGCGAACGTCGTCAGGaccaaaaatcaacaaaaaatctTTGTCCAGAAATTTCAAAGTCTGGTGATGTTAATTCGTGTCGTTATCAAGATAAGTGTAGATTCAGCCACGATATTGAAGCCTTCAAGGCACAGAAACCGGATGATTTGGAAGGTGAATGTCCTTTCTTGAAATCTGAAGGGTCTTGCCCTTATGGATTATCATGTAGATTTTTAAGTACTCATGAAGAGGGTAAGCCATTATCTTCTAATGGATTGGAGAAAAGGTCTGAAGTGAATGGTTTTAGCAAAGATGTTCAAAAGCTTTTGTGGAAAAATAAGATGACCTACCCCAAAGCTGATGCTAAACTCAAAGCTCTTGGCCTCTTTAGTAAGCCAAAAGTGAATAACTTGGAAAACAAAGATGGTGGTGACAAATGTGTTCAGTCTGATGAAAATGGCTCTTGTGCGGTTACATCTGAATTGGAAAACAATGACGGTGTTGACAAATGCCATCTGTCTGACGATGATGGCTCTTGTGGGGTTGCTGATGACTCAGGTTCTAAGTTAGAAAGCTCTGCAGAAGTTAAAAAAGACGATGACATTACTAGAGAACTTGAATCTGATATAATCTGTCCcctaaagagaagaaaaactGAAGAAAATTGTGAAGATGTTGAGACACAAAATGAAGGTGTGAGTGTTGTTGACCAAAATGTTGATGGAAACTGCATAAAATCTGAACCAGAGGCAGGAAGTGAAGCTATAACCCCAGAAACTGATCTAAGCTTGAAGTCGCACTCACGTGAAAAGAAGCTTATTGATTTCAGGGAGAAGTTGTATCTTGCACCCTTGACCACTGTTGGAAATCTCCCTTTCCGGAGAGTTTGCAAAGTATTAGGAGCTGATGTAACATGTGGTGAAATGGCAATGTGCACAAATCTTTTGCAGGGTCAAGCTTCTGAATGGGCATTGCTGAGACGCCATTCATCTGAAGAGTTATTTGGTGTACAAATCTGTGGTGCATATCCAGATACTGTGGCGCGTACAGTTGAACTAATAGAAAAGGAATGTACAGTAGATTTCATTGATATAAATATGGGGTGCCCTATTGACATTGTTGTGAATAAGGGTGCTGGATCAGCTCTTCTTACAAAACCAATGCGCATGAAAAGTGTTGTAGAAGTAGCTTCAGGCACAGTCGATATACCAATAACTATCAAGGTACGGACAGCTTATTTTGAGGGGAAGAATCGTATCGACTCTCTGATAGCAGACTTTAACTCTTGGGGAGCTAGTGCAGTGACAATACATGGCAGGTCACGGCAACAACGCTATAGCAAGCTTGCTGATTGGGATTATGTATATCAGTGTACCAAGAAAGCCCCTAATAATTTGCAAGTAGTGGGGAATGGAGATGTTTTTTCATTTGTAGACTGGAACAACCATAAAACTGAATGCCCTGAACTTGCTACATGCATGATTGCCCGTGGTGCACTTATTAAACCATGGTTATTTACGGAGATAAAGGAACAAAGACATTGGGATATCAGTTCTGGTGAGCGGCTAAATATTTTCCAAGATTTTGTGAATTTTGGTCTTCAACATTGGGGTTCAGATACAAAAGGGGTGGAGACAACTAGGCGATTCTTGTTGGAATGGCTTAGCTATACTTGTAGGTACATACCTGTTGGTCTTTTGGAAGTGGTTCCACAACGAATAAATTGGCGTCCACCATCTTACTATGGGCGTGATGACCTTGAGACACTGATGGCCTCAGATTCTGCAGCCGACTGGGTGCGTTTATCAGAGATGTTACTTGGCAAAGTTCCAGAAGGCTTTACTTTTGCACCAAAGCATAAATCAAATGCTTACGATCGAGCTGAAAATGGTTAA | 2088 | 0.4124 | MDGGEDHSHQGSTLVIHQTTEQLIARCIAPVKKNFIRPPPDRTTPSQNDAVSIPNDKPPLLAKEKKSKRQLKRERRQDQKSTKNLCPEISKSGDVNSCRYQDKCRFSHDIEAFKAQKPDDLEGECPFLKSEGSCPYGLSCRFLSTHEEGKPLSSNGLEKRSEVNGFSKDVQKLLWKNKMTYPKADAKLKALGLFSKPKVNNLENKDGGDKCVQSDENGSCAVTSELENNDGVDKCHLSDDDGSCGVADDSGSKLESSAEVKKDDDITRELESDIICPLKRRKTEENCEDVETQNEGVSVVDQNVDGNCIKSEPEAGSEAITPETDLSLKSHSREKKLIDFREKLYLAPLTTVGNLPFRRVCKVLGADVTCGEMAMCTNLLQGQASEWALLRRHSSEELFGVQICGAYPDTVARTVELIEKECTVDFIDINMGCPIDIVVNKGAGSALLTKPMRMKSVVEVASGTVDIPITIKVRTAYFEGKNRIDSLIADFNSWGASAVTIHGRSRQQRYSKLADWDYVYQCTKKAPNNLQVVGNGDVFSFVDWNNHKTECPELATCMIARGALIKPWLFTEIKEQRHWDISSGERLNIFQDFVNFGLQHWGSDTKGVETTRRFLLEWLSYTCRYIPVGLLEVVPQRINWRPPSYYGRDDLETLMASDSAADWVRLSEMLLGKVPEGFTFAPKHKSNAYDRAENG | 695 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu07g00083 | 695 | Coils | Coil | 61 | 81 | - | - | |
Tsu07g00083 | 695 | Pfam | CCCH-type zinc finger | 85 | 109 | IPR041367 | - | |
Tsu07g00083 | 695 | MobiDBLite | consensus disorder prediction | 34 | 88 | - | - | |
Tsu07g00083 | 695 | Pfam | Dihydrouridine synthase (Dus) | 346 | 580 | IPR035587 | - | |
Tsu07g00083 | 695 | PANTHER | TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE | 29 | 695 | - | - | |
Tsu07g00083 | 695 | Gene3D | Aldolase class I | 338 | 581 | IPR013785 | - | |
Tsu07g00083 | 695 | SUPERFAMILY | FMN-linked oxidoreductases | 343 | 656 | - | - | |
Tsu07g00083 | 695 | ProSiteProfiles | Zinc finger C3H1-type profile. | 80 | 111 | IPR000571 | GO:0046872 | |
Tsu07g00083 | 695 | SMART | c3hfinal6 | 121 | 148 | IPR000571 | GO:0046872 | |
Tsu07g00083 | 695 | SMART | c3hfinal6 | 81 | 110 | IPR000571 | GO:0046872 | |
Tsu07g00083 | 695 | ProSitePatterns | Uncharacterized protein family UPF0034 signature. | 427 | 445 | IPR018517 | GO:0008033|GO:0017150|GO:0050660 | |
Tsu07g00083 | 695 | Gene3D | - | 75 | 155 | - | - | |
Tsu07g00083 | 695 | ProSiteProfiles | Zinc finger C3H1-type profile. | 124 | 149 | IPR000571 | GO:0046872 | |
Tsu07g00083 | 695 | PANTHER | TRNA-DIHYDROURIDINE(47) SYNTHASE [NAD(P)(+)]-LIKE | 29 | 695 | - | - | |
Tsu07g00083 | 695 | CDD | DUS_like_FMN | 343 | 578 | IPR035587 | - |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | C3H | Tsu07g00083 | Dus | 1.3e-49 | CL0036 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu07g00083 | K05544 | - | gmx:100783494 | 1082.01 |