Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00082 ATGGCAGCATCGAATCTCTTTACCCTCTCTAACCCTAaactctctttttcttcttttaaacctTTCAAATATTCAACCACCAACCCTTGTTTTTTCCCTAACAAAACTCTTTTCAATCATAATTCAAACCACAACACAATAACACTTTCTCACTCCCACGACTATAAAACACTTTCTCCATGCAACAGCAACAACACATTTTCATTCACAAATGATCATGATGACGACGAAAAGCCTCGTGAAGAATGCGGCGTTGTTGGTATCTACGGCGATCCAGAAGCTTCTCGTCTCTGTTATCTCGCTCTCCACGCTCTTCAACACCGTGGACAAGAAGGTGCCGGTATCGTAGCTGTCAACGATAATAACGTCCTTCAAACCATTACCGGCGTTGGTCTTGTTTCCGAAGTTTTCAACGACACCAAACTCCGTCAATTACCAGGAACCTTAGCCATCGGCCATGTCCGTTACTCAACCGCAGGACAATCCATGCTCAAGAACGTTCAACCGTTTGTTGCAGGTTACAGGTTTGGTTCTGTTGGTGTTGCTCACAATGGAAATTTCGTTAATTATCGTTCTTTAAGAAATGAACTTGAAGAATctggttcaatttttaatacTACTTCTGATACTGAAGTTTTACTTCATCTTATTGCAATTTCAAATCATAGACCTTTTATAGCTAGAGTTATTGATGCTTGTGAAAAAGTTAAAGGTGCTTATTCAATTGTGTTTGTTACTGAAGATAAACTTGTTGCTGTTAGAGATCCTCACGGTTTTCGACCGTTGGTTATGGGAAGAAGAAGTAATGGTTCTATTGTTTTTGCTTCTGAAACATGCGCTCTTGATTTGATTGAAGCTACTTATGAAAGAGAGATTTATCCTGGCGAAGTCGTGGTTGTGGATAAAAATGGTATTCAATCTCATTGTCTTGTTTCTCATCCAGAACCAAAACAATGTATTTttgaacatatttatttttcactaCCAAATTCTGTTGTTTTTGGGAAATCTGTTTACGAATCAAGAAGATTGTTTGGTGAAATATTGGCTTCTGAGAGTCCTGTTGATTGTGATGTTGTGATAGCAGTTCCTGATTCTGGTGTTGTAGCTGCACTTGGTTATGCTGCAAAAGCCGGTGTTCCTTTTCAACAAGGGTTGATTAGGTCACACTATGTTGGTAGAACTTTCATTGAGCCATCACAGAAGATTAGAGATTTTGGTGTGAAGTTGAAGCTTTCACCGGTTCGCGCTGTTCTTGAAGGGAAaagagttgttgttgttgatgattcaATTGTGAGAGGAACAACATCATCTAAAATTGTGAGGCTGTTAAAAGAAGCTGGTGCTAAAGAAGTTCATATGAGAATTGCATGTCCGCCAATTATTGGGTCTTGTTATTATGGTGTGGATACACCTAGCTCAGGAGAATTGATATCTAATAGGATGAGCGTGGATGAGATTAAAGAATTTATTGGTTGTGATTCACTTGCTTTTCTACCTCTTGATAGTTTGAAGAAATTGTTGGCTAATGATTCTTCTAATTTCTGTTATGCTTGTTTCACTGGGAAATATCCTGTTAAACCTGATGAACTTAATTAA 1599 0.3677 MAASNLFTLSNPKLSFSSFKPFKYSTTNPCFFPNKTLFNHNSNHNTITLSHSHDYKTLSPCNSNNTFSFTNDHDDDEKPREECGVVGIYGDPEASRLCYLALHALQHRGQEGAGIVAVNDNNVLQTITGVGLVSEVFNDTKLRQLPGTLAIGHVRYSTAGQSMLKNVQPFVAGYRFGSVGVAHNGNFVNYRSLRNELEESGSIFNTTSDTEVLLHLIAISNHRPFIARVIDACEKVKGAYSIVFVTEDKLVAVRDPHGFRPLVMGRRSNGSIVFASETCALDLIEATYEREIYPGEVVVVDKNGIQSHCLVSHPEPKQCIFEHIYFSLPNSVVFGKSVYESRRLFGEILASESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIACPPIIGSCYYGVDTPSSGELISNRMSVDEIKEFIGCDSLAFLPLDSLKKLLANDSSNFCYACFTGKYPVKPDELN 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00082 532 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 2, CHLOROPLASTIC 16 530 - -
Tsu07g00082 532 TIGRFAM purF: amidophosphoribosyltransferase 83 525 IPR005854 GO:0004044|GO:0009113
Tsu07g00082 532 CDD GPATase_N 83 334 IPR035584 -
Tsu07g00082 532 SUPERFAMILY PRTase-like 319 528 IPR029057 -
Tsu07g00082 532 Gene3D - 343 507 IPR029057 -
Tsu07g00082 532 CDD PRTases_typeI 341 457 IPR000836 -
Tsu07g00082 532 Hamap Amidophosphoribosyltransferase [purF]. 82 524 IPR005854 GO:0004044|GO:0009113
Tsu07g00082 532 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 83 303 IPR017932 -
Tsu07g00082 532 PIRSF Pur1 79 531 IPR005854 GO:0004044|GO:0009113
Tsu07g00082 532 Pfam Glutamine amidotransferase domain 162 281 IPR017932 -
Tsu07g00082 532 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 83 319 IPR029055 -
Tsu07g00082 532 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 16 530 - -
Tsu07g00082 532 Pfam Phosphoribosyl transferase domain 342 454 IPR000836 -
Tsu07g00082 532 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 83 525 IPR029055 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00082 Tsu-Chr7 534244 536341 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00082 63 530 PRT Gene Family AT4G34740 84.009 0.0 816
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00082 K00764 - pop:18097889 825.469