Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00079 ATGGCCATTAGATCAAAATCAAGTAAACTTGCTCAAAACACAGTCCTTAAACAAATACTAAGAAGATGTGCAAGCTTAGGTAAGAAGTATGATGAAGAGGATGATCAAGGTCTTCCTGTTGATGTCCCAAAAGGTCATTTTGCTGTTTATGTTGGTGAAAACAGAAGCAGATACATTGTTCCAATCTCATTCTTGACACACCCTCAGTTTCAGTCCCTCCTTCGACAAGCTGAAGAAGAATTTGGCTTTGATCATCATAAGGGTCTCACCATTCCTTGTCAAGAAGTTGTTTTTCGCTCCCTAACATCAATTATGCTCAGATCATGA 327 0.3884 MAIRSKSSKLAQNTVLKQILRRCASLGKKYDEEDDQGLPVDVPKGHFAVYVGENRSRYIVPISFLTHPQFQSLLRQAEEEFGFDHHKGLTIPCQEVVFRSLTSIMLRS 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00079 108 Pfam Auxin responsive protein 28 104 IPR003676 GO:0009733
Tsu07g00079 108 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 8 106 IPR003676 GO:0009733
Tsu07g00079 108 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 8 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00079 Tsu-Chr7 513898 514388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00079 39 101 Calmodulin-binding Proteins AT3G43120 55.556 2.90e-21 81.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00079 K14488 - gmx:100805634 168.318