Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00077 ATGGGTTTTCGCTTACCTGGTATTAGACGATCAACATCTAGCAAACAAGTTGAAGTGCCAAAAGGCTATCTTGCGGTGTATGTTGGAGACAAAATGAAGAGGTTCTTGATTCCAATATCTTTCTTGAATGAGCCTTCATTTCAAGAATTTCTTAACCAAGCTGAAGAGGAATTTGGTTACTGTCATCCAATGGGCGGTCTTACAATTCTCTGCAAGGAAGATGTCTTCTTACATACAGCTTCTCGCTTGAACGGACAGTAA 261 0.4023 MGFRLPGIRRSTSSKQVEVPKGYLAVYVGDKMKRFLIPISFLNEPSFQEFLNQAEEEFGYCHPMGGLTILCKEDVFLHTASRLNGQ 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00077 86 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 11 84 - -
Tsu07g00077 86 Pfam Auxin responsive protein 13 81 IPR003676 GO:0009733
Tsu07g00077 86 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 11 84 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00077 Tsu-Chr7 504164 504759 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00077 18 76 Calmodulin-binding Proteins AT3G43120 52.542 8.33e-16 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00077 K14488 - gmx:100500615 141.739