Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00075 ATGGGCTTCCGTTTACCTGCAGCTATAAGAAGGGCTTCATTTAGCAGTAGCCAAACATCATCGAAAATCACAAATGTTCCAAAGGGCTATCTTGCCGTGTACGTTGGAGACGAAATGAAGCGGTTTGTGATCCCCATGTCATACTTGAACCAAACTTCATTTCAAGACTTGTTGAGTCGAGCAGAAGAAGAATTCGGATATGATCATCCAATGGGTGGCCTCACAATTCCTTGCACAGAAGATGATTTTTTGCATATTACTTCTCGCTTCAACGGGCAATAA 282 0.4255 MGFRLPAAIRRASFSSSQTSSKITNVPKGYLAVYVGDEMKRFVIPMSYLNQTSFQDLLSRAEEEFGYDHPMGGLTIPCTEDDFLHITSRFNGQ 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00075 93 Pfam Auxin responsive protein 11 88 IPR003676 GO:0009733
Tsu07g00075 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 92 - -
Tsu07g00075 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 92 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00075 Tsu-Chr7 499369 502550 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00075 15 86 Calmodulin-binding Proteins AT3G43120 48.611 1.61e-20 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00075 K14488 - gmx:113002344 140.584