Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00072 atgGGTTTTCGCTTACCTGGTATTAGACGATCATCATTTAGTGCAAGTCAATCATCTAGGAAGGAAATGGAAGTCCCAAAAGGCTATCTTGCAGTGTATGTTGGACAGAAAATGAAGAGGTTCTTGATTCCAGTATCATTCTTAAATGAGCCTTTATTTCAAGAATTGCTAAGCCAATCTGAAGAGGAATTCGGTTACAGTCATCCAACGGGCGGTCTTACAATTCCCTGCAATGAAGATGTCTTCTTACATACAGCTTCTCGCTTGAACAACTTGTAA 279 0.3943 MGFRLPGIRRSSFSASQSSRKEMEVPKGYLAVYVGQKMKRFLIPVSFLNEPLFQELLSQSEEEFGYSHPTGGLTIPCNEDVFLHTASRLNNL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00072 92 Pfam Auxin responsive protein 10 87 IPR003676 GO:0009733
Tsu07g00072 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 90 - -
Tsu07g00072 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 90 IPR003676 GO:0009733
Tsu07g00072 92 MobiDBLite consensus disorder prediction 1 21 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00072 Tsu-Chr7 494974 495526 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00072 14 91 Calmodulin-binding Proteins AT3G43120 46.154 4.87e-20 77.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00072 K14488 - gmx:100500615 138.658