Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00067 ATGGGCTTCCGTTTACCTGCAGCTATAAGAAGGGTTTCATTTAGCAGTAGCCAAACATCATCGAAAGTCACAAATGTGCCAAAGGGCTATCTTGCAGTGTACGTTGGAGAGGAAATGAAACGGTTTGTGATCCCCATGTCATACTTGAACCAAACTTCATTTCAAGACTTGCTGAGTCAAGCAGAAGAAGAATTCGGATATGATCATCCAATGGGTGGTCTCACAATTCCTTGCACAGAAGATGATTTTTTGAATATTACTTCTCGCTTCAATGAGCTATAA 282 0.4078 MGFRLPAAIRRVSFSSSQTSSKVTNVPKGYLAVYVGEEMKRFVIPMSYLNQTSFQDLLSQAEEEFGYDHPMGGLTIPCTEDDFLNITSRFNEL 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00067 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 91 IPR003676 GO:0009733
Tsu07g00067 93 Pfam Auxin responsive protein 10 88 IPR003676 GO:0009733
Tsu07g00067 93 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 1 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00067 Tsu-Chr7 485579 485860 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00067 15 83 Calmodulin-binding Proteins AT3G43120 50.725 2.56e-20 78.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00067 K14488 - gmx:112998546 142.124