Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00064 ATGGGTTTTCGCTTACCTGGTATTAGACGATCATCATCTAGCAAACAAGTGGAAGTGCCAAAAGGCTACCTTGCAGTTTATGTTGGAGAGAAAATGAAGAGGTTCTTGATTCCAATATCTTTCTTGAATGAGCCTTTGTTTCAAGAATTGCTTAGCCAAGCTGAAGAGGAATTCGGTTACTGTCATCCAATGGGTGGTCTTACGATTCCCTGCAAGGAAGATGTCTTCTTGCATACAGCTTCTTGCTTGAACAACTTGTAA 261 0.41 MGFRLPGIRRSSSSKQVEVPKGYLAVYVGEKMKRFLIPISFLNEPLFQELLSQAEEEFGYCHPMGGLTIPCKEDVFLHTASCLNNL 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00064 86 Pfam Auxin responsive protein 12 82 IPR003676 GO:0009733
Tsu07g00064 86 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 11 84 - -
Tsu07g00064 86 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 11 84 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00064 Tsu-Chr7 480196 480456 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00064 18 85 Calmodulin-binding Proteins AT3G43120 52.941 1.20e-20 78.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00064 K14488 - gmx:100500615 151.369