Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00059 atggGTTTTCGCTTATCTGGTATTAGACGATCATCATCTAGCAAACAAGTGGAAGTGCCAAAAGGCTATCTTGCAGTGTATGTTGGAGAGAAAATGAAGAGGTTCTTGATTCCATTATCATTCTTGAATGAGCCTTTATTTCAAGAGTTGCTTAGCCAAGCTGAAGAGGAATTCGGTTACTGTCATCCAATGGGTGGTCTTACGATTCCCTGCATGGAAGATGTTTTCTTACATACAACTTCTCGCTTGAACAACTTGTAA 261 0.3908 MGFRLSGIRRSSSSKQVEVPKGYLAVYVGEKMKRFLIPLSFLNEPLFQELLSQAEEEFGYCHPMGGLTIPCMEDVFLHTTSRLNNL 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00059 86 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 10 84 - -
Tsu07g00059 86 Pfam Auxin responsive protein 12 82 IPR003676 GO:0009733
Tsu07g00059 86 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 10 84 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00059 Tsu-Chr7 471707 472296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00059 18 76 Calmodulin-binding Proteins AT3G43120 57.627 1.47e-18 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00059 K14488 - gmx:100500615 146.747