Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00058 ATGTTGTTGTTACCGGATTTCTTTACTTCAGACGTTTGTTTTACCAAAAAGCTTGAGCTTGTTGCATTTAGTTCTGTGTATCAGGATAGGCCACCTACAGTTGTCATCAGAAATGCATTTGCAGGAACTATTAGATGGGCTTCACTTAGCAGTAGCCAAACATCATCTAAAGTATCAAATATCCCAAAGGGATATCTAGCCGTGTACGTTGGAGAGGAAATGAAGCGGTTTGTTGTCCCCTTGTCATACTTGAACCAACCTTCATTTCAAGACTTGTTGAGTCGAGCAGAGGAAGAATTTGGATATGATCATCCAATGGGTGGCCTCACAATTCCTTGCGGAGAAGATGTTTTCTTGCACACCACTTCTCGCTTCAATGGACTATAA 387 0.4134 MLLLPDFFTSDVCFTKKLELVAFSSVYQDRPPTVVIRNAFAGTIRWASLSSSQTSSKVSNIPKGYLAVYVGEEMKRFVVPLSYLNQPSFQDLLSRAEEEFGYDHPMGGLTIPCGEDVFLHTTSRFNGL 128
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00058 128 Pfam Auxin responsive protein 50 123 IPR003676 GO:0009733
Tsu07g00058 128 PANTHER SAUR-LIKE AUXIN-RESPONSIVE FAMILY PROTEIN 43 126 - -
Tsu07g00058 128 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 43 126 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00058 Tsu-Chr7 470034 471265 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00058 50 118 Calmodulin-binding Proteins AT3G43120 47.826 1.14e-18 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00058 K14488 - gmx:113002344 136.732