Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00056 ATGGGTATCCGTCTTCCATTTATGGTTCTTCATGCAAACAAGATATTCAAGTCATCATCACAGCATCTACATAGTAGAAATCATTCCAATGTTCCAAAGGGACATGTAGCTGTCTATGTTGGAGAATCTCAGAAGAAGCGTTTTGTGGTTCCAATATCTTACTTAAACCATCCTTCATTTGTTGATTTGTTAAATCGAGCTGAGGAAGAGTTTGGCTACAATCATCCAATGGGTGGTCTCACTATTCCTTGCAAAGAAGAAGCATTTATCAATCTTACCTCTCAACTGCGTGAATGCATCTTGAAACATTGA 312 0.3814 MGIRLPFMVLHANKIFKSSSQHLHSRNHSNVPKGHVAVYVGESQKKRFVVPISYLNHPSFVDLLNRAEEEFGYNHPMGGLTIPCKEEAFINLTSQLRECILKH 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00056 103 Pfam Auxin responsive protein 15 94 IPR003676 GO:0009733
Tsu07g00056 103 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 1 97 IPR003676 GO:0009733
Tsu07g00056 103 PANTHER AUXIN-RESPONSIVE PROTEIN SAUR21-LIKE 1 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00056 Tsu-Chr7 462668 462979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00056 30 103 Calmodulin-binding Proteins AT3G43120 47.297 3.24e-16 67.8