Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00042 ATGTCTTCAAACCACGGAGAAGACAACGACGACCTGGATCTCCTGCTTTCCCTTCAGGACGACACTGTTCTTGAAACCCCTCCCGCTTCTCCCTCTCCGCTTGATGACGATGTGTCGTTCACACACAAGCAAAGGGAGAAACCCGACATGTCTGTTTTCAGAGATGCCGTTCAAGATTGCCTTCTCCACCAACCctctaaccctaaccctaaacctaatCCTAAATCAATTACTAAACCCCCTTTCAACCACGACGATATTGACAAATTCTCTGGTCTTCGCATAAGGAACCAATGTTTAACCCCTGCTGAATTTAGGGAATGTGTTCAAGACATTCGTTTTGTTCGCCTACCCGTCATCAAGAATTTGGTGAATGGAGATACTTTCTCTGGAAGTTGGGTAACTGTTGGAGTGTTGACTGAGAAAGGGGCTCAGAAAACAAGTTCAAATGGGAAGAGTTACTGTATATGGAAAATTGGCTGTTTGGATGAAAATACCGTTTCTCTTTTCTTGTTTGGAGATGCTTATCAGAGGAATTGCCATGAGCCAGCAGGCACCGTCTTCGCACTCTTCAATTCTTCTGTCCGCAAGGATGCCAAGGGTAATGGTTTTTCTTTGAGTATATACTCCCCTAACCAAATTATGAAGATGGGCACCTCTGTTGATTACGGTGTTTGCAAAGGGAAAAGAGCCGATGGGATGACTTGTACACTGGTCATAAATAAGCGTCAGGGAACTTATTGTAAATATCACAAATCAAAATCATCAGAGAAATATTCCACAGGGCGAACTGAACTCAAGGGAGGAAACTTAAGAACATCATTTAGGCCAAAAAATTATCTCAAGTCAGAAGGGATATACTTAGTTGACCCCCTCGCTGACAAAACAAACTTGAAAAAGTCTAAGCCACTGAAATTGTTATCCGTGGATGGTCTCAGAAAGGCTTTGAGCAATGCAGGAAAAGTAACAACAACTTCACACTCGCAAGGAATTAGATTTCTTTCTGAGGTTACAGTTAAAGCGGAtcaaaaaatgatgaaaaatgaACCAAAGACTCGAAATGAACAAAGCAGATGCGCAGAGAAGAGGAAGTCATCTTCTGTGAATAAGGGACAATCTTCTCTCATAAGAAACCAACAGTTAGATGTAAAAAGAGTAAAAACAGAAGGGCAAGGTTTGGTCGATAAAACCACAAAGAGTATGGGAAAGATGATTGAACTCGATCTTGTTAGTTCAGATGAGGATTTCTGA 1251 0.4061 MSSNHGEDNDDLDLLLSLQDDTVLETPPASPSPLDDDVSFTHKQREKPDMSVFRDAVQDCLLHQPSNPNPKPNPKSITKPPFNHDDIDKFSGLRIRNQCLTPAEFRECVQDIRFVRLPVIKNLVNGDTFSGSWVTVGVLTEKGAQKTSSNGKSYCIWKIGCLDENTVSLFLFGDAYQRNCHEPAGTVFALFNSSVRKDAKGNGFSLSIYSPNQIMKMGTSVDYGVCKGKRADGMTCTLVINKRQGTYCKYHKSKSSEKYSTGRTELKGGNLRTSFRPKNYLKSEGIYLVDPLADKTNLKKSKPLKLLSVDGLRKALSNAGKVTTTSHSQGIRFLSEVTVKADQKMMKNEPKTRNEQSRCAEKRKSSSVNKGQSSLIRNQQLDVKRVKTEGQGLVDKTTKSMGKMIELDLVSSDEDF 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00042 416 MobiDBLite consensus disorder prediction 366 381 - -
Tsu07g00042 416 PANTHER PROTEIN MCM10 HOMOLOG 34 373 IPR040184 GO:0003690|GO:0003697|GO:0006270
Tsu07g00042 416 Pfam Primase zinc finger 218 263 IPR015408 GO:0005634|GO:0006260
Tsu07g00042 416 MobiDBLite consensus disorder prediction 1 48 - -
Tsu07g00042 416 Gene3D - 80 252 IPR012340 -
Tsu07g00042 416 MobiDBLite consensus disorder prediction 62 82 - -
Tsu07g00042 416 MobiDBLite consensus disorder prediction 344 381 - -
Tsu07g00042 416 MobiDBLite consensus disorder prediction 344 365 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00042 23 415 Core DNA Replication Machinery Family AT2G20980 54.703 4.65e-131 381
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00042 K10736 - gmx:100527758 520.005