Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00041 ATGACAGTGAAAGAGAGATGTATTTTGGTGGGAATTAGAATTGATAGCCATAGCAGACATGTTCTCAATTGGGCTATAGTCAAAGTTGCTCAACCTGGTGATTCTGTTATTGCAATCCATGTTGTTACAAATCCAGatCATGTTTCTGAAAGCAAGGTTTTGGTAGATGATTATTTAGAGGTTTATGAAGAGTTATGCAACGCTAAAAAGGTACATCTCTCTGTTCATATCTTCACAGGAAGATCTATTCGAAATATTCTCCTCAGAGAAGCAAAAAACAGTGGTGCTATTGCTCTATTGGTAGGGGGCGGAGCTTCAACGGCTAAGTATTGCGCGAAACGACTACCAGACAGCACCGATGTTATCGGTATGCAGGATGCACGAATTGTGTTCCAAAGGTGCACCGATAATAAACAACTAATAGGTGGTGTTATAGATGATCCAAGACCAAGTCTTATTAGCAAGGTGGTCCTGTCTGCATTTGAAGGCAACTTGGGGAATGAGAATTCAAGAAGCCAACAAGATAATACAAAATTGGAGGAAGAATCATTTAAAGAAGAGATGAAACTGTCATCAAGATTATCAACATCACAGAAGCTTGGATGGCCGCTTCTGCGCAGGGCACATACAGAAATGTCGAGGGACGTGTCTGTAGTTCAATGGGCAATGAACTTACCAGATCGGTCAACACACATTTCATCACAAATTAAAGACCAGAGCTATAGAAAAAGTAAGAGTTTCAATAGCTGCAAGTGGTTCATCTTTGAGGTTCTTGAGTCTTGCACTTGTCAATTCTCTGAAGAAAATGTGATTGGAATTGGAGGCAGCAATCGCGTGTACAGAGGAACCCTTCCTGATGGAAAGCCGGTGGCAGTTAAAGTTATGCAGTCGTCAAAACAAGCCTTGAAAGATTTTGCACTTGAAGTGGAAATAATGTCCTCATTGAACCATACATCCATTGCTCCTCTACTTGGAATTTGCATTAAGGATGAGACTTTGATATCTGTTTATGATTACTTTCCGCAAGGAACCTTGGACCAAAATCTACGCGGTAAGAACAAGGATGGATCTATGTTGTCATGGGAAGACAGATTTAAGATAGCAGTTGGGATCGGTGAAGCACTGAATTACCTGCACAATCAAACATCCAAGCCGATTATACATAGAGATGTCAAGTCTTCCAACATTCTTCTTTCCCACGGGTTTGAGCCACATTTATCTGATTTTGGACTTGCTATGTGGGGACCAACAAGTTCATCTTTTGTGATACAAGATGATGTGGTAGGTACCTTTGGTTATCTTGCACCAGAATATTTCATGTATGGAAAGGTCAGTGACAAAATAGATGTCTATGCCTTTGGTATAGTCCTACTTGAACTTATATCAGGGAGGGAACCAATTGACTCCAAAACTTGCCAAGAACATGAAAGTTTGGTCACATGGGCAAAACCAATTTTAGAGAGTGGGGATGTTAAAAGGTTATTGGATCCAAACTTGGAAGGGAAGTTTGATATATCCCAAATGAACAAAATGGTTCTGGCAGCATCTCTATGCATTACACAGTCTGCACGCCTTCGTCCTGCAATGAATCAGGTACTGAAGATCTTAAAAGGATGTGATGAGAAAGTCGAAAACTTATTTAAGCCTCACAAGGGTGATCATTCGGAAAGTCAAgaaaatattgatgatgaagTGTATCCAAGTTCAAGTGCAGAACTGCATTTGAGCCTTGCATTACTTGATGTTGACAATGATACTGCATCATATAGTAGTATAGAGAACAgtaataatagtgaaaatttCAAAGAACCATGGAGCAGATCATctagttttaattaa 1839 0.3921 MTVKERCILVGIRIDSHSRHVLNWAIVKVAQPGDSVIAIHVVTNPDHVSESKVLVDDYLEVYEELCNAKKVHLSVHIFTGRSIRNILLREAKNSGAIALLVGGGASTAKYCAKRLPDSTDVIGMQDARIVFQRCTDNKQLIGGVIDDPRPSLISKVVLSAFEGNLGNENSRSQQDNTKLEEESFKEEMKLSSRLSTSQKLGWPLLRRAHTEMSRDVSVVQWAMNLPDRSTHISSQIKDQSYRKSKSFNSCKWFIFEVLESCTCQFSEENVIGIGGSNRVYRGTLPDGKPVAVKVMQSSKQALKDFALEVEIMSSLNHTSIAPLLGICIKDETLISVYDYFPQGTLDQNLRGKNKDGSMLSWEDRFKIAVGIGEALNYLHNQTSKPIIHRDVKSSNILLSHGFEPHLSDFGLAMWGPTSSSFVIQDDVVGTFGYLAPEYFMYGKVSDKIDVYAFGIVLLELISGREPIDSKTCQEHESLVTWAKPILESGDVKRLLDPNLEGKFDISQMNKMVLAASLCITQSARLRPAMNQVLKILKGCDEKVENLFKPHKGDHSESQENIDDEVYPSSSAELHLSLALLDVDNDTASYSSIENSNNSENFKEPWSRSSSFN 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00041 612 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK7 ISOFORM X1 4 238 - -
Tsu07g00041 612 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK7 ISOFORM X1 244 590 - -
Tsu07g00041 612 Gene3D Phosphorylase Kinase; domain 1 227 339 - -
Tsu07g00041 612 ProSiteProfiles Protein kinase domain profile. 265 547 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00041 612 ProSitePatterns Serine/Threonine protein kinases active-site signature. 386 398 IPR008271 GO:0004672|GO:0006468
Tsu07g00041 612 SUPERFAMILY Protein kinase-like (PK-like) 245 536 IPR011009 -
Tsu07g00041 612 SMART serkin_6 265 536 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00041 612 PANTHER OS08G0249100 PROTEIN 4 238 - -
Tsu07g00041 612 PANTHER OS08G0249100 PROTEIN 244 590 - -
Tsu07g00041 612 MobiDBLite consensus disorder prediction 590 612 - -
Tsu07g00041 612 Pfam Protein kinase domain 266 526 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu07g00041 612 Gene3D HUPs 6 113 IPR014729 -
Tsu07g00041 612 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 7 103 - -
Tsu07g00041 612 Gene3D Transferase(Phosphotransferase) domain 1 340 564 - -
Tsu07g00041 612 CDD USP_Like 8 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00041 Tsu-Chr7 357739 360737 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00041 248 536 Receptor kinase-like Gene Family AT3G58690 41.837 1.81e-71 234
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Tsu07g00041 Pkinase 1.4e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00041 - - mtr:MTR_3g117850 971.074