Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu07g00031 ATGTCCAAAGAAGTGAGCGAAGAAGGTCACCAACCTCATCACCATGGGGGGAAGGACTATGTTGACCCACCACCAGCACCTCTCCTTGACTTCGCTGAAATTAAGCTCTGGTCCTTCTACAGAGCTCTCATAGCTGAGTTCATAGCAACACTCCTCTTCCTCTACGTCACCATTGCCACCGTCATTGGTCACCAAAAACAAACCGGACCATGCGACGGTGTTGGCCTTCTAGGCATAGCATGGTCCTTCGGTGGTATGATCTTTGTCCTTGTCTACTGTACCGCCGGTATCTCCGGTGGCCACATTAACCCTGCAGTCACATTCGGCCTTTTCTTAGCTCGTAAAGTGTCTCTCATAAGAGCGGTTTTATACATGGTAGCACAGTGTTTGGGTGCTATTTGTGGCGTTGGATTGGTGAAAGCTTTCATGAAACACCCTTACAACCACCTTGGCGGTGGTGCTAACTCCGTTGCTTCTGGTTACTCCAAAGGCTCTGCTCTCGGTGCTGAGATAATCGGTACTTTTGTGCTTGTTTACACCGTTTTCTCAGCTACTGACCCAAAGAGAAGCGCACGTGACTCACATGTCCCAGTTTTGGCTCCTTTGCCAATTGGTTTTGCTGTTTTCATGGTTCATCTTGCAACTATACCAATTACCGGTACCGGAATCAACCCTGCAAGGAGCTTCGGTGCTGCTGTTATCTTCAACAATGCCAAAGTTTGGGATGACCATTGGATCTTTTGGGTTGGACCGTTCGTGGGAGCAGCTGCGGCTGCTGCATACCATCAGTACATTCTGAGAGCTGCGGCTATCAAGGCGTTGGGCTCCTTCAGAAGCAATCCCACCAACTAA 852 0.4941 MSKEVSEEGHQPHHHGGKDYVDPPPAPLLDFAEIKLWSFYRALIAEFIATLLFLYVTIATVIGHQKQTGPCDGVGLLGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAVLYMVAQCLGAICGVGLVKAFMKHPYNHLGGGANSVASGYSKGSALGAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFNNAKVWDDHWIFWVGPFVGAAAAAAYHQYILRAAAIKALGSFRSNPTN 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu07g00031 283 ProSitePatterns MIP family signature. 101 109 IPR022357 -
Tsu07g00031 283 SUPERFAMILY Aquaporin-like 33 267 IPR023271 -
Tsu07g00031 283 MobiDBLite consensus disorder prediction 1 20 - -
Tsu07g00031 283 Gene3D Glycerol uptake facilitator protein. 26 283 IPR023271 -
Tsu07g00031 283 TIGRFAM MIP: MIP family channel proteins 45 261 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu07g00031 283 MobiDBLite consensus disorder prediction 1 21 - -
Tsu07g00031 283 PRINTS Major intrinsic protein family signature 41 60 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu07g00031 283 PRINTS Major intrinsic protein family signature 83 107 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu07g00031 283 PRINTS Major intrinsic protein family signature 120 139 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu07g00031 283 PRINTS Major intrinsic protein family signature 169 187 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu07g00031 283 PRINTS Major intrinsic protein family signature 205 227 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu07g00031 283 PRINTS Major intrinsic protein family signature 245 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu07g00031 283 CDD MIP 41 265 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu07g00031 283 PANTHER BNAC03G65520D PROTEIN 1 282 - -
Tsu07g00031 283 Pfam Major intrinsic protein 34 262 IPR000425 GO:0015267|GO:0016020|GO:0055085
Tsu07g00031 283 PANTHER AQUAPORIN OR AQUAGLYCEROPORIN RELATED 1 282 IPR034294 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu07g00031 Tsu-Chr7 298919 300285 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu07g00031 1 283 Major Intrinsic Protein MIP AT4G35100 89.046 0.0 512
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu07g00031 K09872 - thj:104804325 523.087