Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03857 ATGAAACTACAGGCACATATTCCAGGGCAGATATCCGGACAGGTACCCAATCAAGCAGGGTCTCAGTTGCCTGGACACGCCCAACTCAATGGGAATTCCCTCCCATCACAGATGCCATCTTTAGGTGGTGTATCACGATCAGCAATTAATATGGATCCTGAACTTCGTAGAGCACGCGCATTTATTCAAGAGAAgatATGTGAGATGTTATTGCAACGTCATCCGCAGCCAACTACTGAAATGCAAAAAATGAAGATTAAGGATCTTTCAAAACGCCTGGAGGAGGGCATGTTAAAAGCTGCTATCACTAAGGAGGACTACATGAACTTGAATACACTAGAGAGTCGTTTATCTAATTTCCTCCGAAGAGCATCTATGGGTAATCACAACCAACCGTATCCCCAGCTTGTTAGCTCGTCTCCAATTGGTACAATGATACCAACCCCTGGTATGTCGCATGGTCCAAATTCAAACATGGTGGTTGCATCTTCTATAGACGCCTCAATGATTTCTTCCAGTGGGTGTAATAATAGCATAGTATCGACATCTTTCAATAGTGTAAATATGCTACCAGCAGGTGGGATGCTTGGCAGTTCGTTAAATAGATCTGATGGTTTGTCAAATGGATATCAGCAGTCTTCTACCAGCTTCTCTGTTGGCTCAGGGGGGAACATGCCGTCAATGGGTGTGCCGAGAATTTCAAGCCAGATGATTCCAACACCGGGATTTACAGTCAACAGCAACCACTCACACATGAATATAGATTCATCTACTAATGGTAGTGTCTTTTCCAGTGCAGACTCTACTATGGTACCACAGTCACAGCTGGAGCAGCAGAAACAGCACATTGGTGACCAAAGTCATGTATTGCCGAACCTTGGCAGCCAAATGAGCAGTGGAATGAGATCTGGTTTGctacaaaaacaatttactAACTCAAATGGTGCTATAAATAGTGGGCTAGGTTTGATTGGTAACAATATCCAACTTGTAAATGAACCAGGCAGTTCCGATGGCTATGCCTCAAACTATGCCAATTCCCCTAAACACATACATCAGCACTTTGACCAAAATCAGAAACCAGTAGTGCAGGGTGATGGATATGGATTGAATAATGTTGACCCTTTTGCTTCTGGAAACTTTTATGCATCTGCAACATCTTCTGGGTCTATGATGAATACTCAGAACACAAATTCAGTAAAATTGCCATCAATACCCAAAACTAGCTCATTGATCAGTGGTCACTCAAATTTGCATGGTATGCAGCAGGCTGCTCATATAAAGTCTCAAGCAATCAATCAATTGGAAAAGTTGAATTTTCAGTCTTCATCGACTTCAAGGGATGCTCTTCTGCATTCTCAACAGCAGTATCCACAAAGGCCCCAGCAATTTCAACAGCCAGAGCAGTATTCACAATCACAGCAACAATTTCAATTGAAACTACATAGTCAACAGCCTCAGCATTTGGTCAACGATGATGCTTTCAATCAGTCTCAGTTGTCTTCCAATCTAGAAAACCAAGTGAAGTCAGAGCCTGGAATTGAGCACCATAAAGACCTACTCAATTCTCATGCTCCCGAACAGTTCCATATGTCTGAGATGCAGAATCAGTTCCAGCAAAATTCATCCGAAGATTGCTCTAGGAGTGCCCAATACATTTCCTTTCCATCTGGTCAGCATGATTTATCCTCATCAGCACCTCAAAATTCGCAACAAATGTTGCATCCACACCAATTGGTTGCAGAATCTCAAAATAAGTTCAGCTGCCTTACAGTTGGGGCACAATCCAATTCCAAATCAGTAGTTCTAAACCAATGGCCTGACTCACAAGATGGTAACCACATGTCTAACAATATTTCACATGAACAGCATCTCCATGTGGATTTTCATCAAAGAATATCAGGGAAGGATGATGCCCATTGCAATAATTTATCATCAGATGTATCTATGGGCCAAGCTGTAGCTCCTAGAGGTGCAACTGAGTCACTAGACCCAGGAAGCGCTACCAAAAAGGCACACAGGAATCAACAAAGGTGGCTTTTATTTCTACTTCATGCTCGGAAATGTTCTGCTCCTGAAGGACGATGCCAAGAACATTCTTGTTCTAGTGCACGGAAGTTATGTAAGCACATTGATGGATGCACTCTGCGTCATTGTCCAGTCCCACGTTGTCATCATACCAGGGTATTGCTTCATCATTTCATACACTGTAAGGATCCGTGTTGCCCTGTTTgtgtttttgtaaaaaattaccGGCGTGCATTTCAACTTAAGCCTCAAATTCAGCCAGAATCTGAATCAAATTTGCCAAGTGTGGTAAATGGATCCTGTAAATCTTACAATATTACAGCTTCATCATCTAGATTGATCTCAAAACCTACATTAGTTGTGGAAACTTCAGAAGACCTGCACCCATCTCTAAAACGCATTAAGATTGAGCATTGCACACAGTCTgttaatcttgaaaatgacaatTCTGCATCATCTGTTTCTGCAAATTGTGAATCTCTTGTTTCCAGGGATGCTCAGTCCCAAACTTATCCCAATGCAGAGAAGTCTATCTCAATTAAATCTGAGCTTACAGAAGTAAAAGCAGAAGTTTTGGCTCATGCTAAGCTTAGCGATATGAAGATGGATTCCAATAATACAGATGATAAAATTCTTGATGGTAAGTCTGCCAAGAATGATGATCCTGGTAATTCAGCTAGGCCAGAAAATATAAAAACCGAGAAAGAAATTGGACAAGATAAACAAGAAAATGCGATGCAGCAGAGTGAAAATGCAGCTGGAACAAAGTCTGGTAAGCCAAAAATAAAGGGGGTCTCTTTAACCGAATTATTTACTCCAGAGCAAGTACGGGAACATATCACTGGTCTCAGGCAATGGGTTGGCCAAAGCAAATCAAAGGCAGAGAAGAATCAAGCAATGGAGCACGCTATGAGCGAGAATTCCTGTCAATTATGTGCTGTAGAGAAGCTTACATTTGAACCACCACCTATTTATTGCACAACATGTGGGGTTCGCATCAAAAGAAACAATATGTACTATACCATGGGTACTGGTGATACTCGGCATTATTTTTGTATCCCATGCTATAATGATGCTCGTACAGAACACATTGTTGTTGATGGGACTCCCATTGCTAAGTCAAGAttggaaaagaagaagaatgatgaGGAAACCGAGGAATGGTGGGTTCAATGTGATAAATGTGAAGCTTGGCAGCACCAAATATGTGCCTTGTTTAATGGAAGAAGAAATGATGGTGGACAAGCTGAATACACTTGCCCTAACTGTTACATTGAAGAGGTAGAACGAGGAGAGCGCATGCCATTACCCCAAAGTGCTGTTCTTGGAGCAAAGGATTTACCGAGAACTATTCTTAGTGACCATATAGAACAACGATTATTTAAGCGGCTAAAGCACGAAAGACAAGAGAGAGCAAGGTTTCATGGGAAAACCTATGACGAGGTGCCTGGAGCTGATTCCCTTGTTGTAAGAGTTGTGTCATCTGTTGACAAGAAGTTAGAAGTGAAACAGCGCTTTTTGGAGATTTTTCAGGAAGAAAATTACCCAACAGAATTCCCATATAAATCAAAGGTAGTTTTGCTGTTTCAAAAGATTGAAGGTGTGGAAGTATGCCTATTTGGCATGTATGTTCAAGAATTTGGAGCTGAATGTCAATTTCCCAATCAGCGCCGGGTGTATCTTTCATATTTGGACTCTGTGAAGTATTTCAGGCCCGAGATTAAATCGGTAACTGGAGAGGCTCTTCGAACATTTGTTTACCATGAAATTCTGaTTGGATACCTTGAATATTGTAAGTTACGTGGTTTTACCAGCTGCTATATTTGGGCTTGTCCTCCGTTAAAGGGTGaagattatattttatattgccATCCAGAAATTCAGAAAACACCAAAATCTGACAAGCTTCGTGAATGGTGA 3948 0.4065 MKLQAHIPGQISGQVPNQAGSQLPGHAQLNGNSLPSQMPSLGGVSRSAINMDPELRRARAFIQEKICEMLLQRHPQPTTEMQKMKIKDLSKRLEEGMLKAAITKEDYMNLNTLESRLSNFLRRASMGNHNQPYPQLVSSSPIGTMIPTPGMSHGPNSNMVVASSIDASMISSSGCNNSIVSTSFNSVNMLPAGGMLGSSLNRSDGLSNGYQQSSTSFSVGSGGNMPSMGVPRISSQMIPTPGFTVNSNHSHMNIDSSTNGSVFSSADSTMVPQSQLEQQKQHIGDQSHVLPNLGSQMSSGMRSGLLQKQFTNSNGAINSGLGLIGNNIQLVNEPGSSDGYASNYANSPKHIHQHFDQNQKPVVQGDGYGLNNVDPFASGNFYASATSSGSMMNTQNTNSVKLPSIPKTSSLISGHSNLHGMQQAAHIKSQAINQLEKLNFQSSSTSRDALLHSQQQYPQRPQQFQQPEQYSQSQQQFQLKLHSQQPQHLVNDDAFNQSQLSSNLENQVKSEPGIEHHKDLLNSHAPEQFHMSEMQNQFQQNSSEDCSRSAQYISFPSGQHDLSSSAPQNSQQMLHPHQLVAESQNKFSCLTVGAQSNSKSVVLNQWPDSQDGNHMSNNISHEQHLHVDFHQRISGKDDAHCNNLSSDVSMGQAVAPRGATESLDPGSATKKAHRNQQRWLLFLLHARKCSAPEGRCQEHSCSSARKLCKHIDGCTLRHCPVPRCHHTRVLLHHFIHCKDPCCPVCVFVKNYRRAFQLKPQIQPESESNLPSVVNGSCKSYNITASSSRLISKPTLVVETSEDLHPSLKRIKIEHCTQSVNLENDNSASSVSANCESLVSRDAQSQTYPNAEKSISIKSELTEVKAEVLAHAKLSDMKMDSNNTDDKILDGKSAKNDDPGNSARPENIKTEKEIGQDKQENAMQQSENAAGTKSGKPKIKGVSLTELFTPEQVREHITGLRQWVGQSKSKAEKNQAMEHAMSENSCQLCAVEKLTFEPPPIYCTTCGVRIKRNNMYYTMGTGDTRHYFCIPCYNDARTEHIVVDGTPIAKSRLEKKKNDEETEEWWVQCDKCEAWQHQICALFNGRRNDGGQAEYTCPNCYIEEVERGERMPLPQSAVLGAKDLPRTILSDHIEQRLFKRLKHERQERARFHGKTYDEVPGADSLVVRVVSSVDKKLEVKQRFLEIFQEENYPTEFPYKSKVVLLFQKIEGVEVCLFGMYVQEFGAECQFPNQRRVYLSYLDSVKYFRPEIKSVTGEALRTFVYHEILIGYLEYCKLRGFTSCYIWACPPLKGEDYILYCHPEIQKTPKSDKLREW 1315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03857 1315 ProSiteProfiles CBP/p300-type histone acetyltransferase (HAT) domain profile. 1117 1315 IPR031162 GO:0004402
Tsu06g03857 1315 SMART KAT11_2 1150 1315 IPR013178 GO:0004402|GO:0006355|GO:0016573
Tsu06g03857 1315 CDD PHD_HAC_like 1027 1099 - -
Tsu06g03857 1315 ProSitePatterns Zinc finger PHD-type signature. 1028 1099 IPR019786 -
Tsu06g03857 1315 SUPERFAMILY FYVE/PHD zinc finger 1061 1101 IPR011011 -
Tsu06g03857 1315 ProSiteProfiles Zinc finger TAZ-type profile. 667 748 IPR000197 -
Tsu06g03857 1315 Pfam Histone acetylation protein 1158 1315 IPR013178 GO:0004402|GO:0006355|GO:0016573
Tsu06g03857 1315 Pfam TAZ zinc finger 677 745 IPR000197 -
Tsu06g03857 1315 SMART TAZ_2 670 748 IPR000197 -
Tsu06g03857 1315 MobiDBLite consensus disorder prediction 877 917 - -
Tsu06g03857 1315 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1052 1100 IPR013083 -
Tsu06g03857 1315 PANTHER ZINC FINGER, TAZ-TYPE-RELATED 142 1315 - -
Tsu06g03857 1315 Pfam PHD-finger 1058 1100 IPR019787 -
Tsu06g03857 1315 PANTHER CBP/P300-RELATED 142 1315 IPR013178 GO:0004402|GO:0006355|GO:0016573
Tsu06g03857 1315 MobiDBLite consensus disorder prediction 246 283 - -
Tsu06g03857 1315 MobiDBLite consensus disorder prediction 877 937 - -
Tsu06g03857 1315 MobiDBLite consensus disorder prediction 10 34 - -
Tsu06g03857 1315 SUPERFAMILY TAZ domain 669 752 IPR035898 -
Tsu06g03857 1315 MobiDBLite consensus disorder prediction 203 228 - -
Tsu06g03857 1315 MobiDBLite consensus disorder prediction 1 34 - -
Tsu06g03857 1315 MobiDBLite consensus disorder prediction 443 486 - -
Tsu06g03857 1315 Gene3D TAZ domain 666 774 IPR035898 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03857 Tsu-Chr6 50660995 50669402 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Tsu06g03857 HAT_KAT11 1.7e-24 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03857 K04498 - gmx:100787114 2123.59