Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03855 atgaatatgATATTATCGAACATCCATGGTGTTTGGGGGATTATTGTTGCCTCTGTTCTTCttcttaatatattattattgtttgtttggAAGAAGAAGCGTAATAACAGATTATTCTCCGCCTCCTCATCATCTTCATCCACAGTACCCTCTTTGCTCTCCGATTCAAACCTAGTTAGAACCTCAAAGATTGTGGTCACTGATGCAGATTTGAAGTTTTTAATGGATATTTTAGATGAAAATCTAAATCAGAATCATAAATGGGAGCCTGTCatagataaaacaaacaatcaaCTATACTACAATGCCAAATGCTGCAAGCCCAAGAATGGTCCCCTGAGATATTTGAGCGCTACTGTATTCAATGATATTTCAGCTGAGATGCTAAGAAACTTCTACATGGACAATGACTACAGAAAGCAGTGGGATAAGACAGTAGTTGAGCACAATCAACTGCAGGTGGACGAATCTGATGGTTCTGAAGTTGGTCGTACAGTTAAAAAGTTCCCTCTTTTGAAGCCTAGAGAATATGTGTTAACTTGGAAGTTGTGGGAGGGGAGGGATAAAACTTTTTATTGTTACATGAAGGAATGTGAACATCCTTTGGCACCACGACAGAGAAAATATGTACGAGTTGAGATTTTCAGATCTGGGTGGCGAATAAGAAAAGTACCTGGTAGAAATGCCTGTGAGATCACTATGTTTCATCAGGAAGATGCTGGTTTGAATGTGGAGATGGCAAAACTGGCTTTTTCCAAAGGCATATGGAGTTATGTATGCAAGATGGATAATGCGCTTAGAAGATACTCTGCCGCAAGCTGCCATTTATCCAGTTCAGTTACCACTTCAGTCAATTTAATGCAAAAGGTACCGGCTTGCTTGGAATCTAGTACAAGCGATGTATCTTCAGCTCATTCCACTATGATTCATGATCAAGCTACTCAAGAATCTCAAATGGGTATGATCTCAAGAAGGCCATCAAGGAAATTAGTAACCAATAGTTTGCTGCTTCTAGGGGGTGCAATATTCCTGTCTCGTGGTCACTCTAGCCTAGGTGCTAAAGTTGTGATGGCATACATCTGCACAAAATTCATCTCAACCACCACCACAGTTCAATGCAAAACATCCTCCCAAGATGTTTCAGCCCTTAATGTGATATACACCAGCTTGAATTCTCCTTCCCAACTCAGTGGCTGGAAATCAAGCGGAGGTGATCCTTGTGGTGAATCCTGGGAAGGAATCAAATGCTCTGGCTCATCTGTCACCGAAATAGATTTATCTGATTTCGGACTTTCGGGATCAATGGGCTACCAGTTGTCAAGCTTAACATCAGTTACCTACTTTGATTTgagcaacaacaacctcaacgGTCAAATACCGTATCAACTCCCTCCAAATGCTCGTACCATAGATCTTTCTAAGAATGAATTCAGTGGAAGTATACCTTATTCCATTGGTCAGATGAAAGACCTCAACTCTCTAAATCTTGCACATAATCAGCTCAATAACGATCTGGGAGATATGTTTAAGAGCCTCACTAAACTCAAACAATTGGATGTATCATTCAATTCACTATCAGGAAACCTGCCTCAGAGTCTTAAATCACTCACAAGCCTCAAGAAGATACATCTGCAAAACAATAAATTCTCTGGTTCAATAAATGTCCTTGTTGACCTTCCACTTGATGATGTGAATGTTGAGAACAACAAATTTACTGGTTGGATTCCTGAGGAGTTAAAGGATATAAATAACTTGCAaaCTGAAGGAAACTCTTGGTCAACTGGGCCAGCACCACCTCCTCCTCCCGGTACACATCATATCAAGCATTCCGAGAAAAATGATGGACAGTCTGTTGTAATTGGAGTGGTTATAGCCGGTGTAACTTTTGGTGTGCTGGCCGTAATCATAATCATTGTTGCTCTTTCTAAAAGAAGGCCATCTTTTCCTTCTTCACGTTTTATTGATGAAGAGAGACATAGCCAGGACCGATCTTTTACACCGCTTGCATCTCAGGAGTTGTCTAAAGATTCAGGTACTTATGTCTGCACAGAATACAAAGGTGGATTTAAGACAGTGGATTACACTTCAATTGACATGAAGGCTTTACAAAAACTTCCATCAATTGGTGTCAGGTCATCAGTCTCTGATTGTGTACAAACCTTTAATGACAATGAGTTTGTGAAGCGCCTAAATTCTAGAAGAAGCACATCAATCCGCTGTACTCCCTTTTCATTGGGAGAGTTGCAAATTGGTACTGCTAACTTTGCTTCAGGTCGACTTCTTGGTGAAGGATCCATTGGACCTGTTTATCGTGCCAAATATGCTGATGGAAAGgTATTCgctgtaaaaaaaatcaaccctTCACTTTTAGATGGAGGTTCTCCAGAGGAATTCTCTCAGACTGTAACAAGCATCTGCAAACTTCGTCATCCAAATATTGCTGAGGTTGTTGGTTATTGTTCAGAACAGGAGCACATGTTAATATATGATTATTTCAGAAATGGTTCTCTCCACGAATTTTTACACGTATCAGATGACTTCAGCAAACCATTAACTTGGAACACCAGAGTCAGAATTGCATTGGGAACTGCTCGGGCTATTGAGTACCTACATGAAATTTGTTCTCCACCTTTAGTTCACAAGAATATCAAATCCTCCAATATTTTGCTTGACACAGATTTGAATCCCCGTCTCTCAGACTACGGTTTGGCATCCTTTCACCagCGTACTAGCCAAAATCTTGGGGCAGGATATAATGCACCAGAATGCACAAAACCATNCCTTGAAGAGCGATATATACGGTTTTGGTGTAGTGATGCTCGAACTTTTGACAGGTCGAAAGCCTCTGGACAGGTAAGTTCAAAGCCAAAAGCAGAGCAATGTCTGGTTCGTTGGGCTACCCCGCAGCTTCATGACATAAATGCTATGGAAAAAATGGTAGATCCTGCCTTGCGGGGACTTTACCCTCCTAAATCACTCTTCGGATTTGCTGAGATCATTGCCCTTTGTGTTCAGTCTGATCCCGAATTTCGGCCACCTGCATCAGAGGTGGTTCAGGCATTGGTGCGATTAGTTCAGGattcaaatatgaaaatgaGAGAGGATCTTGGTGCCAGTCGGAtggatgattatgatgattga 3141 0.3967 MNMILSNIHGVWGIIVASVLLLNILLLFVWKKKRNNRLFSASSSSSSTVPSLLSDSNLVRTSKIVVTDADLKFLMDILDENLNQNHKWEPVIDKTNNQLYYNAKCCKPKNGPLRYLSATVFNDISAEMLRNFYMDNDYRKQWDKTVVEHNQLQVDESDGSEVGRTVKKFPLLKPREYVLTWKLWEGRDKTFYCYMKECEHPLAPRQRKYVRVEIFRSGWRIRKVPGRNACEITMFHQEDAGLNVEMAKLAFSKGIWSYVCKMDNALRRYSAASCHLSSSVTTSVNLMQKVPACLESSTSDVSSAHSTMIHDQATQESQMGMISRRPSRKLVTNSLLLLGGAIFLSRGHSSLGAKVVMAYICTKFISTTTTVQCKTSSQDVSALNVIYTSLNSPSQLSGWKSSGGDPCGESWEGIKCSGSSVTEIDLSDFGLSGSMGYQLSSLTSVTYFDLSNNNLNGQIPYQLPPNARTIDLSKNEFSGSIPYSIGQMKDLNSLNLAHNQLNNDLGDMFKSLTKLKQLDVSFNSLSGNLPQSLKSLTSLKKIHLQNNKFSGSINVLVDLPLDDVNVENNKFTGWIPEELKDINNLQTEGNSWSTGPAPPPPPGTHHIKHSEKNDGQSVVIGVVIAGVTFGVLAVIIIIVALSKRRPSFPSSRFIDEERHSQDRSFTPLASQELSKDSGTYVCTEYKGGFKTVDYTSIDMKALQKLPSIGVRSSVSDCVQTFNDNEFVKRLNSRRSTSIRCTPFSLGELQIGTANFASGRLLGEGSIGPVYRAKYADGKVFAVKKINPSLLDGGSPEEFSQTVTSICKLRHPNIAEVVGYCSEQEHMLIYDYFRNGSLHEFLHVSDDFSKPLTWNTRVRIALGTARAIEYLHEICSPPLVHKNIKSSNILLDTDLNPRLSDYGLASFHQRTSQNLGAGYNAPECTKPXLEERYIRFWCSDARTFDRSKASGQVSSKPKAEQCLVRWATPQLHDINAMEKMVDPALRGLYPPKSLFGFAEIIALCVQSDPEFRPPASEVVQALVRLVQDSNMKMREDLGASRMDDYDD 1046
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03855 1046 Pfam Protein kinase domain 757 924 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g03855 1046 Pfam START domain 77 239 IPR002913 GO:0008289
Tsu06g03855 1046 Gene3D Transferase(Phosphotransferase) domain 1 832 934 - -
Tsu06g03855 1046 Gene3D Transferase(Phosphotransferase) domain 1 937 1043 - -
Tsu06g03855 1046 SUPERFAMILY Protein kinase-like (PK-like) 733 1021 IPR011009 -
Tsu06g03855 1046 Gene3D - 61 271 IPR023393 -
Tsu06g03855 1046 SUPERFAMILY Bet v1-like 76 270 - -
Tsu06g03855 1046 PANTHER OS01G0253100 PROTEIN 369 1041 IPR045271 GO:0004714|GO:0006468
Tsu06g03855 1046 ProSiteProfiles Protein kinase domain profile. 755 1024 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g03855 1046 PANTHER PROTEIN STRUBBELIG-RECEPTOR FAMILY 5 369 1041 - -
Tsu06g03855 1046 ProSiteProfiles START domain profile. 59 271 IPR002913 GO:0008289
Tsu06g03855 1046 Gene3D Phosphorylase Kinase; domain 1 717 831 - -
Tsu06g03855 1046 MobiDBLite consensus disorder prediction 585 611 - -
Tsu06g03855 1046 Gene3D Ribonuclease Inhibitor 373 607 IPR032675 -
Tsu06g03855 1046 Pfam Leucine rich repeat N-terminal domain 377 417 IPR013210 -
Tsu06g03855 1046 SUPERFAMILY L domain-like 374 586 - -
Tsu06g03855 1046 CDD START_STARD2_7-like 65 269 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03855 Tsu-Chr6 50633900 50644717 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03855 354 1045 Strubbelig Receptor Gene Family AT1G78980 57.546 0.0 781
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Tsu06g03855 Pkinase 2.8e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03855 - - mtr:MTR_4g005130 1033.09