Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03852 ATGGGGTCTGAAACCAGCAAAAGCATTGATGGCCTTGGAAGTGTTATAGGCACTGTTTTCACGGCTCCATTCAAGACTGTCCTTGGTGGATCATGCGAACTTGGTGTATGCCAATGCATAGGAAGAAGCCTTTGTAAGATGTGTTGTGTCACTTGTGAACTATGCTGCTTTGCTTTACAAAACATCACCATTAACTTGTGGCACAAGCTAATAAATACAAAGAGAGTTTATCGCGGAAGAAGACAATGTTTTCAACATGATGTTGAGCTTGGCACCTCACCCTCAACTGATCATGAAAACAATAGCTTGCGTGATTATAGAAGTCGTCATTTTGGTAGAAAATCATTGAGAGAAAGAAGTAGAAGAAATGGTCACTCTGTTCACCTTTCAAGGATGAAAGGGAAGTCTTGGAGAGTGGAGAGCTCAAGAAAGATCCAATTAAGTAAACAGcggaaggaagaagaagaagaagaagctgatTTCGTAACCAATAAGTCTATACTCTCCTcaaataagaaagaaagaagaaatccCATACTGAAAGGAACTTGGCGACCGGGTTCAGGGGGTGACTTGCCCCAAGGTGGTGGTGAGTACAACCCTTATCCTGTTGCGCGACGTGTCAATTCATCACATTCTATAATGATGGATGCAGACATGGAGTCTGGCTCTTACCATGACAGGCTAAGAACTTTCCCTAACATGCGTGCTAAACCTTACACCCCACTGGTATTTCGTATTCTTTTGGGTATAAATGTTCGTGTCCTGTTCCTTCTTTTACTACTCGGCTTTGGAGCTATCTTTTACATGGGTGCAAAAACATCTCCCATTATTGTTTTTGTCATCTCTATTTGTATTCTCAGCTTCTTTGTGGCCATATATCTTATGAAGTGGGTGCTCGCTAAAGATGAGGGTCCCCCTGAAATGGTTCAGATAGCGGATGCTATACGAGATGGAGCGGAAGGATTTATCAGGACACAGTATGGAACTATATCCAAGATGGCTATGTTGCTTGCTCTTGTCATTCTTTGCATATATTTGTTTCGCAGCACAACTCCTCAACAGGAAGCTTCTGGCATGGGAAGGACAACAACTGCATACATCACTGTGGCTTCTTTCCTTTTAGGCGCCCTTTGTTCAGGTTTTGCCGGATATGTAGGGATGTGGGTGTCAGTTCGTGCCAATGTCAGAGTCTCTAGTGCTGCAAGACGGTCTTCAAGAGAGGCATTGCAGATAGCTACTCGTGCGGGTGGTTTATCAGCTCTCATTGTTGTTGGTATGGCTGTAATTGGTATAGCCGTCCTTTATGCCACATTTTATGTTTGGTTGGGAGTGGACACACCAGGTTCAATGAAGGTCACTGATTTGCCTCTTCTTCTAGTTGGATATGGATTTGGTGCCTCCTTTGTCGCACTGTTTGCTCAGCTGGGTGGTGGAATATACACTAAAGCAGCTGATGTTGGGGCAGACCTTGTTGGAAAAGTAGAACAGGGAATACCTGAAGATGACCCTAGGAATCCCGCTGTTATTGCTGACCTGGTTGGAGACAATGTGGGAGATTGTGCTGCTAGAGGTGCTGATCTTTTTGAAAGTATCGCAGCTGAAATAATCAGTGCCATGATACTTGGGGGAACAATGGCACAACGATATCCATCTGGCTTCATCTTGTTTCCTCTTGTTGTTCACTCATTTGATCTGGTAGTTTCATCAGTGGGAATATTTTCTATTCGGGGTACACGTGAATCTGGAGTATTGTCTCCTATAGAAGATCCTATGGCAATTCTTCAGAAAGGATATTCTGTTACAATAGTTTTAGCTGTTCTTGCATTTGGTCTGTCTACCCGGTGGTTACTTTATGTTGAGCAAGCACCTTCGGCATGGTTCAATTTTGCTTTGTGCGGGTTGGTTGGTATTATTACAGCCTACATTTTTGTCTGGATCACCAAGTATTATACTGACTACAAGCATGAGCCTGTGCGCACATTAGCCCTTTCTAGCTCTACTGGCCATGGGACCAACATAATTGCCGGGGTCAGTTTGGGGCTGGAATCTACAGGTCTTCCGGTCCTTGTCATCAGTGTGGCAATTGTCTCAGCTTACTGGTTGGGCCAGACTGCTGGACTAATAGATGAAACTGGAAACCCAACTGGTGGGCTGTTTGGCACAGCTGTAGCAACAATGGGAATGCTTAGCACTGCTGCCTATATTCTTACCATGGATATGTTTGGCCCAATAGCTGATAATGCTGGAGGAATTGTAGAAATGAGTCAACAGCCCGAAAGTGTTCGAGAAATCACTGATGTCCTTGATGCCGTGGGCAACACAACCAAAGCCACCACCAAAGGATTTGCCATCGGTTCTGCTGCGCTTGCTTCTTTCCTTCTGTTTAGTGCTTATATGGATGAAGTTTCTTCATTTTCTCGTGAACCTTTTAAACAGGTTGATATTGCAATTCCCGAAGTTTTCGTTGGTGGGTTGCTGGGTGCCATGCTTATATTTGTCTTTAGTGCTTGGGCCTGTGCTGCTGTTGGCCGAACTGCACAAGAGGTTGTTAATGAAGTAAGGAGGCAGTTCATTGAGAGGCCCGGTATAATGGATTACAAGGAGAAACCGGATTATGCTCGCTGTGTTGCAATTGTAGCATCTGCATCATTAAGAGAGATGATAAAACCTGGTGCTCTGGCAATCATTTCACCTATTGTAGTTGGTTTTGCATTCCGAATCTTGGGCTACTATACAGGGCAACCTTTACTTGGGGCTAAAGTTGTGGCTGCTTTGCTGATGTTTGCAACTGTGTCTGGTATTCTAATGGCACTTTTTCTGAATACGGCTGGTGGTGCATGGGATAATGCAAAGAAGTACATAGAGACTGGAGCTCTTGGAGGCAAGGGAAGTGATGCTCACAAAGCAGCAATAACAGGAGATACagTGGGAGACCCATTCAAAGACACAGCTGGGCCTTCACTTCATGTCCTTATAAAGATGCTCTCAACGATTACATTGGTAATGGCTCCCATCTTCCTAGATAGGTTGTATGATTCTATGATGTACATCGACGAGCTTGATTTTATAGTCACAGTGAATTTTCTTGTTCTTGATCAGAATAAGAGATTCCCTAAACTTCAATCTATTGCATTGAAGCTCCGTTCACAACCAAGTTCTTCATCTTGTGCAGAGAGAAACTGGAGCACATATTCATTTATCCACCCATTGAAAAGAAATAGGCTcaatcccaagagagttgaggATTTAGTATTTGTTCATACAAATCTACGTCTTCTATCAAGAAACAATAGAAATTATAACGAAGGAGAAACAAAAATGTGGGATATTGGTGGAGATAAATGGAATATGTCTGATGGAGCTGGTTTGCTTGAAGATGCAAGTCTTTCTCTTGATGAACCCGACTTGGAAGCTGttcttttttatgatgatgatgaggaagaCACTGTTAGCTAG 3459 0.4218 MGSETSKSIDGLGSVIGTVFTAPFKTVLGGSCELGVCQCIGRSLCKMCCVTCELCCFALQNITINLWHKLINTKRVYRGRRQCFQHDVELGTSPSTDHENNSLRDYRSRHFGRKSLRERSRRNGHSVHLSRMKGKSWRVESSRKIQLSKQRKEEEEEEADFVTNKSILSSNKKERRNPILKGTWRPGSGGDLPQGGGEYNPYPVARRVNSSHSIMMDADMESGSYHDRLRTFPNMRAKPYTPLVFRILLGINVRVLFLLLLLGFGAIFYMGAKTSPIIVFVISICILSFFVAIYLMKWVLAKDEGPPEMVQIADAIRDGAEGFIRTQYGTISKMAMLLALVILCIYLFRSTTPQQEASGMGRTTTAYITVASFLLGALCSGFAGYVGMWVSVRANVRVSSAARRSSREALQIATRAGGLSALIVVGMAVIGIAVLYATFYVWLGVDTPGSMKVTDLPLLLVGYGFGASFVALFAQLGGGIYTKAADVGADLVGKVEQGIPEDDPRNPAVIADLVGDNVGDCAARGADLFESIAAEIISAMILGGTMAQRYPSGFILFPLVVHSFDLVVSSVGIFSIRGTRESGVLSPIEDPMAILQKGYSVTIVLAVLAFGLSTRWLLYVEQAPSAWFNFALCGLVGIITAYIFVWITKYYTDYKHEPVRTLALSSSTGHGTNIIAGVSLGLESTGLPVLVISVAIVSAYWLGQTAGLIDETGNPTGGLFGTAVATMGMLSTAAYILTMDMFGPIADNAGGIVEMSQQPESVREITDVLDAVGNTTKATTKGFAIGSAALASFLLFSAYMDEVSSFSREPFKQVDIAIPEVFVGGLLGAMLIFVFSAWACAAVGRTAQEVVNEVRRQFIERPGIMDYKEKPDYARCVAIVASASLREMIKPGALAIISPIVVGFAFRILGYYTGQPLLGAKVVAALLMFATVSGILMALFLNTAGGAWDNAKKYIETGALGGKGSDAHKAAITGDTVGDPFKDTAGPSLHVLIKMLSTITLVMAPIFLDRLYDSMMYIDELDFIVTVNFLVLDQNKRFPKLQSIALKLRSQPSSSSCAERNWSTYSFIHPLKRNRLNPKRVEDLVFVHTNLRLLSRNNRNYNEGETKMWDIGGDKWNMSDGAGLLEDASLSLDEPDLEAVLFYDDDEEDTVS 1152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03852 1152 MobiDBLite consensus disorder prediction 113 132 - -
Tsu06g03852 1152 PANTHER INORGANIC DIPHOSPHATASE-RELATED 231 1008 - -
Tsu06g03852 1152 TIGRFAM V_PPase: V-type H(+)-translocating pyrophosphatase 280 1008 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Tsu06g03852 1152 Pfam hAT family C-terminal dimerisation region 1028 1091 IPR008906 GO:0046983
Tsu06g03852 1152 Pfam Inorganic H+ pyrophosphatase 287 1003 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Tsu06g03852 1152 MobiDBLite consensus disorder prediction 113 135 - -
Tsu06g03852 1152 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 275 1008 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Tsu06g03852 1152 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 231 1008 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Tsu06g03852 1152 Coils Coil 138 165 - -
Tsu06g03852 1152 SUPERFAMILY Ribonuclease H-like 1035 1094 IPR012337 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03852 Tsu-Chr6 50591895 50605701 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03852 214 1008 Primary Pumps ATPases AT1G16780 86.035 0.0 1411
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03852 K23025 - gmx:100787805 1373.99