Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03849 ATGGATTCAAAGAAGTCTAACAAGATAACAGATATTGTTAGGCTTCAACAAATCCTCAAGAAGTGGAAAAAGGTTGCTACAAATgcttccaacaacaacaacaataactcgagtaatagtagtagtagtagtagtaatagtGGTAGTAGCAGCACTAGTAATAAAGGTATCAAGTTTTTGAAACGAACTTTGTCATTCACCGATGTGTCTATTTCGAATGTGGAGATCGTTCCAAAAGGGTTCCTAGCTGTTTGTGTAGGGAAAGAGCTCAAGAGATTCATTATTCCAATGGATTACTTAAAACACCAAGCATTTGAGGTGTTGCTTCAAGAAGCTGAAGAGGAGTTTGGTTTCCAACAAGAGGGTGTTCTCAAAATTCCATGTCAAGTATCAATATTTGAGAAAATATTGAAGGTGGTGGAAGATAAAAAAGAAGCCTTAAACATGCATGAGTTTGGATTCAATGGAGAGAAGGATATGGTTAGTTGTGATGTTACACCCACTCATCATGCTCAAGTTTGTAGATGA 528 0.3314 MDSKKSNKITDIVRLQQILKKWKKVATNASNNNNNNSSNSSSSSSNSGSSSTSNKGIKFLKRTLSFTDVSISNVEIVPKGFLAVCVGKELKRFIIPMDYLKHQAFEVLLQEAEEEFGFQQEGVLKIPCQVSIFEKILKVVEDKKEALNMHEFGFNGEKDMVSCDVTPTHHAQVCR 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03849 175 Pfam Auxin responsive protein 21 139 IPR003676 GO:0009733
Tsu06g03849 175 PANTHER OSJNBA0060N03.10 PROTEIN 5 155 - -
Tsu06g03849 175 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 5 155 IPR003676 GO:0009733
Tsu06g03849 175 MobiDBLite consensus disorder prediction 29 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03849 Tsu-Chr6 50583301 50583828 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03849 1 175 Calmodulin-binding Proteins AT4G31320 50.515 3.51e-54 168
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03849 K14488 - zju:107428189 215.698