Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03835 ATGAaggataaagataaagataaggAAAAGGAAACCGAGAAGAAAAAGTATCCTATCGGCGCCGAACATTACATTCTCTACGAAGAGATTGGTCAAGGCGTTAGTGCTTCCGTTTTCCGTGCTCAATGTATTTCTTTCAACGAGATCGTAGCCATCAAGATTCTCGACTTCGAACGTGATAACTGCGATCTGAATAATATATCTCGTGAAGCACAAACAATGGTACTAGTGGACCATCCTAACGTGTTGAAATCACACTGTTCATTCGTTAGCGATCACAATCTATGGGTTGTGATGCCATTCATGTCTGGTGGTTCATGTCTTCACATATTGAAAGCTGCACATCCTGATGGATTCGAAGAGGTTGTTATTGCAACTGTACTTAGGGAGGTATTGAAGGGTTTAGAGTATCTTCATCATCATGGTCATATTCATCGTGACGTTAAGGCTggtaatattttaattgattctCGCGGTGCCATTAAGCTTGGCGATTTCGGTGTTTCTGCTTGTCTTTTTGATTCCGGTGATCGCCAACGCTCTAGAAATACTTTTGTTGGAACACCTTGTTGGATGGCACCTGAGGTCATGGAGCAATTGCATGGTTATAACTTCAAAGCTGACATCTGGTCATTTGGCATAACTGCTTTGGAGCTTGCCCATGGCCATGCTCCTTTCTCTAAGTATCCACCCTTGAAGGTATTGCTTATGACCTTGCAAAATGCACCCCCAGGCCTTGACTATGAAAGGGACAAGAAGTTCTCTAAGTCTTTTAAGCAGATGATTGCTTGTTGTTTGGTGAAAGATCCTTCAAAAAGACCCTCTGCAAACAGGCTGCTAAAACATTCCTTCTTTAAGCAAGCTCGTTCCAGTGATTATATTAGCCGAACTCTATTGGAGGGGCTACCTGCTTTGGGTGATCGCATGGAGATTCTAAAGagaaaagaagaagatatgCGTGCACAAAAGAAAATGGCTGATGGGCAGATGGAGGAATTATCACAGAATGAATACAAACGAGGCATTAGTGGATGGAACTTCAATCTTGAAGATATGAAGGCTCAAGCTTCCTTGATCAACGATTTTGACGATGCTATATCCGATATCAATCATGTGAGTAGTTCAAGTTCCTTATCTAATCTTGATGGGCCGCAAGATAAGCAACTACCAAGTTCTAGTCACAGCCGTTCTCATACTGTTGACATGGAGGATAATAATGAACTACTTAATCAGTTGGCTTCTGTTCTGGCAGTTGATTCCACACTAAATGATGCCAAGACTAAAGTTGAAAAATCTGATGATGACTCTAGCATCACCAGCTCAAGCCACGAACCACAAACTTCTTCCTGTCATGATGATCATGTGGACCAACGTTTAGGTGAAAAATCCAATGTGGAAAATGGTGTAAGATCCACGGAGGGCGTGCCTATCCCTCCTCATCACAGAAGAGGATGTTCATCAAGCACATTACCAGAAGTTACTCTTCCACCTATTCGAGCAGATTGTGAGAAGCTACAAAATCTTCCCTCAAATGTCTCAAGTGCCAATGCAGCTTCAGTTCTACAGACAGGAGAGGACGTGCTTACTGAACTTCCTTCTAGAGTCTCAAAATCATCAGCTAATTCTGATGACACAGATGATAAAGCAAAGGTACCAGTTGTTCAACAGAGAGGACGTTTTAAAGTTACATCTGAGAACGTTGACCCGGAAAAGGTGGCCCCTTCTCCTATACTGCAAAAGAGTCACAGCATGCAGGTTATAAGCCAGCATAATGCTGCTCCTGTACACTCACCATTACCGTTATTATCAACAATATCTGATTCTACGCCATCAACTATTTCTGGCTGTTCTCTGTTCCCTGTGTTGCACTCTGTGCTGCAGACAAATATTCTTCAGAGGGATACCATTCTAACTTTAATGAAGCTAATTACTGCTGGTGATTCTGCTGCTGATAGCACAAATACCCCAGCACAGATAGTAGCAACGGAGAAATCATTGCTTGAATCAGCTCACGAGAGAGAAAAGGAGTTACTTCATGAGATAACTGATCTGCAATGGAGGCTCATATGCACCCAGGAAGAGcttcaaaaattgaaaacagataATGCTCAGGTGTGA 2118 0.4122 MKDKDKDKEKETEKKKYPIGAEHYILYEEIGQGVSASVFRAQCISFNEIVAIKILDFERDNCDLNNISREAQTMVLVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAHPDGFEEVVIATVLREVLKGLEYLHHHGHIHRDVKAGNILIDSRGAIKLGDFGVSACLFDSGDRQRSRNTFVGTPCWMAPEVMEQLHGYNFKADIWSFGITALELAHGHAPFSKYPPLKVLLMTLQNAPPGLDYERDKKFSKSFKQMIACCLVKDPSKRPSANRLLKHSFFKQARSSDYISRTLLEGLPALGDRMEILKRKEEDMRAQKKMADGQMEELSQNEYKRGISGWNFNLEDMKAQASLINDFDDAISDINHVSSSSSLSNLDGPQDKQLPSSSHSRSHTVDMEDNNELLNQLASVLAVDSTLNDAKTKVEKSDDDSSITSSSHEPQTSSCHDDHVDQRLGEKSNVENGVRSTEGVPIPPHHRRGCSSSTLPEVTLPPIRADCEKLQNLPSNVSSANAASVLQTGEDVLTELPSRVSKSSANSDDTDDKAKVPVVQQRGRFKVTSENVDPEKVAPSPILQKSHSMQVISQHNAAPVHSPLPLLSTISDSTPSTISGCSLFPVLHSVLQTNILQRDTILTLMKLITAGDSAADSTNTPAQIVATEKSLLESAHEREKELLHEITDLQWRLICTQEELQKLKTDNAQV 705
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03835 705 Coils Coil 688 705 - -
Tsu06g03835 705 Gene3D Phosphorylase Kinase; domain 1 12 101 - -
Tsu06g03835 705 ProSiteProfiles Protein kinase domain profile. 24 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g03835 705 ProSitePatterns Protein kinases ATP-binding region signature. 30 53 IPR017441 GO:0005524
Tsu06g03835 705 MobiDBLite consensus disorder prediction 374 396 - -
Tsu06g03835 705 CDD STKc_OSR1_SPAK 22 285 - -
Tsu06g03835 705 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 13 704 - -
Tsu06g03835 705 SMART serkin_6 24 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g03835 705 MobiDBLite consensus disorder prediction 374 400 - -
Tsu06g03835 705 Coils Coil 312 336 - -
Tsu06g03835 705 Gene3D Transferase(Phosphotransferase) domain 1 105 339 - -
Tsu06g03835 705 PANTHER SERINE/THREONINE-PROTEIN KINASE FRAY2 13 704 - -
Tsu06g03835 705 MobiDBLite consensus disorder prediction 447 463 - -
Tsu06g03835 705 MobiDBLite consensus disorder prediction 531 550 - -
Tsu06g03835 705 MobiDBLite consensus disorder prediction 426 492 - -
Tsu06g03835 705 Pfam Protein kinase domain 26 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g03835 705 SUPERFAMILY Protein kinase-like (PK-like) 22 286 IPR011009 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Tsu06g03835 Tsu-Chr6 50486327 50493780 Dispersed/Transposed
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03835 13 687 MAP Kinase Kinase Kinase Kinase AT1G79640 63.650 0.0 842
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-Fray Tsu06g03835 Pkinase 1.9e-59 CL0016
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03835 K08835 - gmx:100780339 1137.87