Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Tsu06g03835 | ATGAaggataaagataaagataaggAAAAGGAAACCGAGAAGAAAAAGTATCCTATCGGCGCCGAACATTACATTCTCTACGAAGAGATTGGTCAAGGCGTTAGTGCTTCCGTTTTCCGTGCTCAATGTATTTCTTTCAACGAGATCGTAGCCATCAAGATTCTCGACTTCGAACGTGATAACTGCGATCTGAATAATATATCTCGTGAAGCACAAACAATGGTACTAGTGGACCATCCTAACGTGTTGAAATCACACTGTTCATTCGTTAGCGATCACAATCTATGGGTTGTGATGCCATTCATGTCTGGTGGTTCATGTCTTCACATATTGAAAGCTGCACATCCTGATGGATTCGAAGAGGTTGTTATTGCAACTGTACTTAGGGAGGTATTGAAGGGTTTAGAGTATCTTCATCATCATGGTCATATTCATCGTGACGTTAAGGCTggtaatattttaattgattctCGCGGTGCCATTAAGCTTGGCGATTTCGGTGTTTCTGCTTGTCTTTTTGATTCCGGTGATCGCCAACGCTCTAGAAATACTTTTGTTGGAACACCTTGTTGGATGGCACCTGAGGTCATGGAGCAATTGCATGGTTATAACTTCAAAGCTGACATCTGGTCATTTGGCATAACTGCTTTGGAGCTTGCCCATGGCCATGCTCCTTTCTCTAAGTATCCACCCTTGAAGGTATTGCTTATGACCTTGCAAAATGCACCCCCAGGCCTTGACTATGAAAGGGACAAGAAGTTCTCTAAGTCTTTTAAGCAGATGATTGCTTGTTGTTTGGTGAAAGATCCTTCAAAAAGACCCTCTGCAAACAGGCTGCTAAAACATTCCTTCTTTAAGCAAGCTCGTTCCAGTGATTATATTAGCCGAACTCTATTGGAGGGGCTACCTGCTTTGGGTGATCGCATGGAGATTCTAAAGagaaaagaagaagatatgCGTGCACAAAAGAAAATGGCTGATGGGCAGATGGAGGAATTATCACAGAATGAATACAAACGAGGCATTAGTGGATGGAACTTCAATCTTGAAGATATGAAGGCTCAAGCTTCCTTGATCAACGATTTTGACGATGCTATATCCGATATCAATCATGTGAGTAGTTCAAGTTCCTTATCTAATCTTGATGGGCCGCAAGATAAGCAACTACCAAGTTCTAGTCACAGCCGTTCTCATACTGTTGACATGGAGGATAATAATGAACTACTTAATCAGTTGGCTTCTGTTCTGGCAGTTGATTCCACACTAAATGATGCCAAGACTAAAGTTGAAAAATCTGATGATGACTCTAGCATCACCAGCTCAAGCCACGAACCACAAACTTCTTCCTGTCATGATGATCATGTGGACCAACGTTTAGGTGAAAAATCCAATGTGGAAAATGGTGTAAGATCCACGGAGGGCGTGCCTATCCCTCCTCATCACAGAAGAGGATGTTCATCAAGCACATTACCAGAAGTTACTCTTCCACCTATTCGAGCAGATTGTGAGAAGCTACAAAATCTTCCCTCAAATGTCTCAAGTGCCAATGCAGCTTCAGTTCTACAGACAGGAGAGGACGTGCTTACTGAACTTCCTTCTAGAGTCTCAAAATCATCAGCTAATTCTGATGACACAGATGATAAAGCAAAGGTACCAGTTGTTCAACAGAGAGGACGTTTTAAAGTTACATCTGAGAACGTTGACCCGGAAAAGGTGGCCCCTTCTCCTATACTGCAAAAGAGTCACAGCATGCAGGTTATAAGCCAGCATAATGCTGCTCCTGTACACTCACCATTACCGTTATTATCAACAATATCTGATTCTACGCCATCAACTATTTCTGGCTGTTCTCTGTTCCCTGTGTTGCACTCTGTGCTGCAGACAAATATTCTTCAGAGGGATACCATTCTAACTTTAATGAAGCTAATTACTGCTGGTGATTCTGCTGCTGATAGCACAAATACCCCAGCACAGATAGTAGCAACGGAGAAATCATTGCTTGAATCAGCTCACGAGAGAGAAAAGGAGTTACTTCATGAGATAACTGATCTGCAATGGAGGCTCATATGCACCCAGGAAGAGcttcaaaaattgaaaacagataATGCTCAGGTGTGA | 2118 | 0.4122 | MKDKDKDKEKETEKKKYPIGAEHYILYEEIGQGVSASVFRAQCISFNEIVAIKILDFERDNCDLNNISREAQTMVLVDHPNVLKSHCSFVSDHNLWVVMPFMSGGSCLHILKAAHPDGFEEVVIATVLREVLKGLEYLHHHGHIHRDVKAGNILIDSRGAIKLGDFGVSACLFDSGDRQRSRNTFVGTPCWMAPEVMEQLHGYNFKADIWSFGITALELAHGHAPFSKYPPLKVLLMTLQNAPPGLDYERDKKFSKSFKQMIACCLVKDPSKRPSANRLLKHSFFKQARSSDYISRTLLEGLPALGDRMEILKRKEEDMRAQKKMADGQMEELSQNEYKRGISGWNFNLEDMKAQASLINDFDDAISDINHVSSSSSLSNLDGPQDKQLPSSSHSRSHTVDMEDNNELLNQLASVLAVDSTLNDAKTKVEKSDDDSSITSSSHEPQTSSCHDDHVDQRLGEKSNVENGVRSTEGVPIPPHHRRGCSSSTLPEVTLPPIRADCEKLQNLPSNVSSANAASVLQTGEDVLTELPSRVSKSSANSDDTDDKAKVPVVQQRGRFKVTSENVDPEKVAPSPILQKSHSMQVISQHNAAPVHSPLPLLSTISDSTPSTISGCSLFPVLHSVLQTNILQRDTILTLMKLITAGDSAADSTNTPAQIVATEKSLLESAHEREKELLHEITDLQWRLICTQEELQKLKTDNAQV | 705 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Tsu06g03835 | 705 | Coils | Coil | 688 | 705 | - | - | |
Tsu06g03835 | 705 | Gene3D | Phosphorylase Kinase; domain 1 | 12 | 101 | - | - | |
Tsu06g03835 | 705 | ProSiteProfiles | Protein kinase domain profile. | 24 | 285 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu06g03835 | 705 | ProSitePatterns | Protein kinases ATP-binding region signature. | 30 | 53 | IPR017441 | GO:0005524 | |
Tsu06g03835 | 705 | MobiDBLite | consensus disorder prediction | 374 | 396 | - | - | |
Tsu06g03835 | 705 | CDD | STKc_OSR1_SPAK | 22 | 285 | - | - | |
Tsu06g03835 | 705 | PANTHER | SERINE/THREONINE-PROTEIN KINASE FRAY2 | 13 | 704 | - | - | |
Tsu06g03835 | 705 | SMART | serkin_6 | 24 | 285 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu06g03835 | 705 | MobiDBLite | consensus disorder prediction | 374 | 400 | - | - | |
Tsu06g03835 | 705 | Coils | Coil | 312 | 336 | - | - | |
Tsu06g03835 | 705 | Gene3D | Transferase(Phosphotransferase) domain 1 | 105 | 339 | - | - | |
Tsu06g03835 | 705 | PANTHER | SERINE/THREONINE-PROTEIN KINASE FRAY2 | 13 | 704 | - | - | |
Tsu06g03835 | 705 | MobiDBLite | consensus disorder prediction | 447 | 463 | - | - | |
Tsu06g03835 | 705 | MobiDBLite | consensus disorder prediction | 531 | 550 | - | - | |
Tsu06g03835 | 705 | MobiDBLite | consensus disorder prediction | 426 | 492 | - | - | |
Tsu06g03835 | 705 | Pfam | Protein kinase domain | 26 | 285 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Tsu06g03835 | 705 | SUPERFAMILY | Protein kinase-like (PK-like) | 22 | 286 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Tsu06g03835 | Tsu-Chr6 | 50486327 | 50493780 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Tsu06g03835 | 13 | 687 | MAP Kinase Kinase Kinase Kinase | AT1G79640 | 63.650 | 0.0 | 842 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | STE_STE20-Fray | Tsu06g03835 | Pkinase | 1.9e-59 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Tsu06g03835 | K08835 | - | gmx:100780339 | 1137.87 |