Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Tsu06g03832 ATGAGATTAGATAGAGAGAGAAATGAGATGAAGCCGATTCAACTTCCACCTCCAACCGCCACCGGCTCAGCCACAGCCACAGGTTCTCCCAACCGTCCTCAGCGCCGCCGTAGAGACCTTACCCTTCCTCTTCCACAGCGTGACACAAACCTAGCTGTACCTCTTCCGCTTCCTCCTTCCGGCAGCGGAAGCGGCGGAAGCGGCAGTGGAGGAAACGGAAGCGGAAACGGAAACAACGGTGGAGGAAACGGAGGATCAGCGACTCAACAACTGGTGATTCCGTTCGCGGAGCTAGAGAGATTGAACCGGATCGGAAGCGGTAGCGGAGGAACGGTTTACAAAGTAGTTCACAGAATCAACGGTCGAGCTTACGCTTTGAAGGTGATTTACGGACATCACGAGGAATCAGTTCGTCGTCAGATCCATAGAGAAATCCAGATCTTAAGAGATGTAGATGATCCAAACGTGGTGAAGTGTCACGAGATGTACGATCACAACGCTGAAATTCAGGTTCTGTTAGAATACATGGACGGTGGATCTCTCGAAGGGAAACACATCCCTCAGGAGAATCAGCTTGCTGACGTGGCACGTCAGATCCTCCGTGGACTCGCTTATCTCCACCGTCGTCACATAGTTCACCGTGACATCAAACCGTCGAATCTGTTGATAAATTCACGGAAACAGGTTAAGATCGCTGACTTTGGTGTAGGTAGGATTCTGAATCAAACTATGGATCCGTGTAATTCATCGGTAGGAACAATTGCTTACATGTCGCCGGAGAGGATAAACACCGATATCAACGATGGACAATACGATGCTTACGCCGGTGATATATGGAGTTTAGGAGTGAGTATATTGGAGTTTTATATGGGGAGATTTCCGTTTGCGGTTGGTAGACAAGGTGATTGGGCGAGTTTGATGTGTGCTATTTGTATGTCACAACCACCAGAAGCTCCAACAACTGCTTCGCCGGAGTTTAGGGATTTTGTTTCGCGGTGTTTGCAGAGAGATCCGTCGAGGAGATGGACTGCTTCTCGGTTGCTTTCACATCCATTTCTTGCTAGAACAGTTTCTCATCATAATCAGATTCCACCAAATCTTCATCAACTACTTCCACCACCACCAAGGCCACTTTCATCTTAG 1143 0.4864 MRLDRERNEMKPIQLPPPTATGSATATGSPNRPQRRRRDLTLPLPQRDTNLAVPLPLPPSGSGSGGSGSGGNGSGNGNNGGGNGGSATQQLVIPFAELERLNRIGSGSGGTVYKVVHRINGRAYALKVIYGHHEESVRRQIHREIQILRDVDDPNVVKCHEMYDHNAEIQVLLEYMDGGSLEGKHIPQENQLADVARQILRGLAYLHRRHIVHRDIKPSNLLINSRKQVKIADFGVGRILNQTMDPCNSSVGTIAYMSPERINTDINDGQYDAYAGDIWSLGVSILEFYMGRFPFAVGRQGDWASLMCAICMSQPPEAPTTASPEFRDFVSRCLQRDPSRRWTASRLLSHPFLARTVSHHNQIPPNLHQLLPPPPRPLSS 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Tsu06g03832 380 MobiDBLite consensus disorder prediction 62 88 - -
Tsu06g03832 380 CDD PKc_MAPKK_plant_like 96 353 - -
Tsu06g03832 380 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 32 369 - -
Tsu06g03832 380 SUPERFAMILY Protein kinase-like (PK-like) 98 375 IPR011009 -
Tsu06g03832 380 SMART serkin_6 98 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g03832 380 MobiDBLite consensus disorder prediction 1 88 - -
Tsu06g03832 380 ProSitePatterns Protein kinases ATP-binding region signature. 104 127 IPR017441 GO:0005524
Tsu06g03832 380 Gene3D Phosphorylase Kinase; domain 1 85 177 - -
Tsu06g03832 380 Gene3D Transferase(Phosphotransferase) domain 1 179 366 - -
Tsu06g03832 380 ProSitePatterns Serine/Threonine protein kinases active-site signature. 211 223 IPR008271 GO:0004672|GO:0006468
Tsu06g03832 380 ProSiteProfiles Protein kinase domain profile. 98 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Tsu06g03832 380 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE 4 32 369 - -
Tsu06g03832 380 Pfam Protein kinase domain 99 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Tsu06g03832 Tsu-Chr6 50463000 50464315 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Tsu06g03832 10 369 MAP Kinase Kinase Gene Family AT1G51660 69.167 2.01e-169 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Tsu06g03832 Pkinase 5.6e-66 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Tsu06g03832 K13413 - gmx:100786390 566.229